Hb_000676_130

Information

Type -
Description -
Location Contig676: 81909-83636
Sequence    

Annotation

kegg
ID rcu:RCOM_0533480
description Peroxidase 72 precursor, putative (EC:1.11.1.7)
nr
ID XP_010252386.1
description PREDICTED: peroxidase 72-like [Nelumbo nucifera]
swissprot
ID Q9FJZ9
description Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1
trembl
ID B9S693
description Peroxidase OS=Ricinus communis GN=RCOM_0533480 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 72-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000676_130 0.0 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
2 Hb_014865_010 0.0870623151 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
3 Hb_000956_060 0.1019745957 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
4 Hb_003811_050 0.1069548519 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
5 Hb_002580_020 0.1078991491 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
6 Hb_000975_130 0.1188857882 - - PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
7 Hb_005672_030 0.1265143561 - - PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
8 Hb_000297_220 0.1272613058 - - SAUR family protein [Theobroma cacao]
9 Hb_000417_350 0.1294641768 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002437_010 0.1303532062 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
11 Hb_000853_010 0.13445694 - - Pectinesterase-3 precursor, putative [Ricinus communis]
12 Hb_081191_010 0.1360222536 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
13 Hb_009780_110 0.1399200023 - - PREDICTED: protein RSI-1 [Cicer arietinum]
14 Hb_006834_010 0.1423328197 - - conserved hypothetical protein [Ricinus communis]
15 Hb_009711_040 0.1455910359 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
16 Hb_000429_030 0.1470203686 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
17 Hb_000306_050 0.1500371402 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
18 Hb_012516_030 0.1511570994 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
19 Hb_000993_020 0.1525044206 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
20 Hb_001242_020 0.1533177107 - - hypothetical protein JCGZ_08334 [Jatropha curcas]

Gene co-expression network

sample Hb_000676_130 Hb_000676_130 Hb_014865_010 Hb_014865_010 Hb_000676_130--Hb_014865_010 Hb_000956_060 Hb_000956_060 Hb_000676_130--Hb_000956_060 Hb_003811_050 Hb_003811_050 Hb_000676_130--Hb_003811_050 Hb_002580_020 Hb_002580_020 Hb_000676_130--Hb_002580_020 Hb_000975_130 Hb_000975_130 Hb_000676_130--Hb_000975_130 Hb_005672_030 Hb_005672_030 Hb_000676_130--Hb_005672_030 Hb_001242_020 Hb_001242_020 Hb_014865_010--Hb_001242_020 Hb_002437_010 Hb_002437_010 Hb_014865_010--Hb_002437_010 Hb_009780_110 Hb_009780_110 Hb_014865_010--Hb_009780_110 Hb_001596_030 Hb_001596_030 Hb_014865_010--Hb_001596_030 Hb_000993_020 Hb_000993_020 Hb_014865_010--Hb_000993_020 Hb_000956_060--Hb_000975_130 Hb_000297_220 Hb_000297_220 Hb_000956_060--Hb_000297_220 Hb_004631_030 Hb_004631_030 Hb_000956_060--Hb_004631_030 Hb_012516_030 Hb_012516_030 Hb_000956_060--Hb_012516_030 Hb_000956_060--Hb_003811_050 Hb_003811_050--Hb_000975_130 Hb_000007_070 Hb_000007_070 Hb_003811_050--Hb_000007_070 Hb_081191_010 Hb_081191_010 Hb_003811_050--Hb_081191_010 Hb_003811_050--Hb_002580_020 Hb_009615_030 Hb_009615_030 Hb_002580_020--Hb_009615_030 Hb_002580_020--Hb_081191_010 Hb_006834_010 Hb_006834_010 Hb_002580_020--Hb_006834_010 Hb_000853_010 Hb_000853_010 Hb_002580_020--Hb_000853_010 Hb_000975_130--Hb_005672_030 Hb_000975_130--Hb_000853_010 Hb_000975_130--Hb_004631_030 Hb_005672_030--Hb_003811_050 Hb_005672_030--Hb_000956_060 Hb_005672_030--Hb_002580_020 Hb_005672_030--Hb_000853_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.77415 1.24568 5.49859 0.0327984 0.0307612
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 4.33199 0

CAGE analysis