Hb_012516_030

Information

Type -
Description -
Location Contig12516: 18168-18461
Sequence    

Annotation

kegg
ID pop:POPTR_0005s15210g
description hypothetical protein
nr
ID XP_009599113.1
description PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
swissprot
ID Q43681
description Probable non-specific lipid-transfer protein AKCS9 OS=Vigna unguiculata PE=2 SV=1
trembl
ID A0A067KA29
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13008 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_012516_030 0.0 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
2 Hb_000297_220 0.0751584977 - - SAUR family protein [Theobroma cacao]
3 Hb_004631_030 0.0773105314 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
4 Hb_000956_060 0.0852382852 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
5 Hb_000566_170 0.1056097915 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X4 [Jatropha curcas]
6 Hb_000510_210 0.1146453067 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
7 Hb_000975_130 0.1292923624 - - PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
8 Hb_005144_100 0.1317932713 - - Xyloglucan endotransglucosylase/hydrolase protein 2 precursor, putative [Ricinus communis]
9 Hb_002054_090 0.1353651718 - - PREDICTED: 36.4 kDa proline-rich protein-like [Gossypium raimondii]
10 Hb_131417_010 0.1408395969 - - hypothetical protein POPTR_0011s066602g, partial [Populus trichocarpa]
11 Hb_002374_060 0.1410576109 - - amino acid transporter, putative [Ricinus communis]
12 Hb_000306_050 0.1480595899 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
13 Hb_003266_060 0.1486194313 - - PREDICTED: basic 7S globulin-like [Populus euphratica]
14 Hb_000836_250 0.1489597762 - - hypothetical protein VITISV_022299 [Vitis vinifera]
15 Hb_000676_130 0.1511570994 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
16 Hb_001369_530 0.1529052492 - - 21 kDa protein precursor, putative [Ricinus communis]
17 Hb_106728_020 0.1531535844 - - cytochrome P450, putative [Ricinus communis]
18 Hb_001821_030 0.1533838501 - - hypothetical protein JCGZ_13357 [Jatropha curcas]
19 Hb_011206_050 0.1541722492 - - hypothetical protein POPTR_0011s02840g [Populus trichocarpa]
20 Hb_001998_260 0.1546097428 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_012516_030 Hb_012516_030 Hb_000297_220 Hb_000297_220 Hb_012516_030--Hb_000297_220 Hb_004631_030 Hb_004631_030 Hb_012516_030--Hb_004631_030 Hb_000956_060 Hb_000956_060 Hb_012516_030--Hb_000956_060 Hb_000566_170 Hb_000566_170 Hb_012516_030--Hb_000566_170 Hb_000510_210 Hb_000510_210 Hb_012516_030--Hb_000510_210 Hb_000975_130 Hb_000975_130 Hb_012516_030--Hb_000975_130 Hb_000297_220--Hb_004631_030 Hb_000297_220--Hb_000956_060 Hb_041063_010 Hb_041063_010 Hb_000297_220--Hb_041063_010 Hb_002054_090 Hb_002054_090 Hb_000297_220--Hb_002054_090 Hb_000306_050 Hb_000306_050 Hb_000297_220--Hb_000306_050 Hb_004631_030--Hb_000566_170 Hb_004631_030--Hb_000956_060 Hb_004631_030--Hb_000510_210 Hb_004631_030--Hb_002054_090 Hb_000956_060--Hb_000975_130 Hb_003811_050 Hb_003811_050 Hb_000956_060--Hb_003811_050 Hb_000676_130 Hb_000676_130 Hb_000956_060--Hb_000676_130 Hb_000566_170--Hb_000510_210 Hb_106728_020 Hb_106728_020 Hb_000566_170--Hb_106728_020 Hb_179118_010 Hb_179118_010 Hb_000566_170--Hb_179118_010 Hb_011206_050 Hb_011206_050 Hb_000566_170--Hb_011206_050 Hb_000510_210--Hb_106728_020 Hb_000510_210--Hb_179118_010 Hb_000510_210--Hb_011206_050 Hb_000975_130--Hb_003811_050 Hb_005672_030 Hb_005672_030 Hb_000975_130--Hb_005672_030 Hb_000853_010 Hb_000853_010 Hb_000975_130--Hb_000853_010 Hb_000975_130--Hb_000676_130 Hb_000975_130--Hb_004631_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 44.2289 20.4346 143.95 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.788188 0.621168 0 89.7064 0.473847

CAGE analysis