Hb_000975_130

Information

Type -
Description -
Location Contig975: 84656-86951
Sequence    

Annotation

kegg
ID egr:104445138
description uncharacterized LOC104445138
nr
ID XP_010057260.1
description PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059B1K9
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H02626 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000975_130 0.0 - - PREDICTED: uncharacterized protein LOC104445138 [Eucalyptus grandis]
2 Hb_000956_060 0.057788886 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
3 Hb_003811_050 0.0817780806 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
4 Hb_005672_030 0.1099848812 - - PREDICTED: high mobility group B protein 3-like [Jatropha curcas]
5 Hb_000853_010 0.1153364839 - - Pectinesterase-3 precursor, putative [Ricinus communis]
6 Hb_000676_130 0.1188857882 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
7 Hb_004631_030 0.1201482511 - - PREDICTED: putative clathrin assembly protein At4g40080 [Jatropha curcas]
8 Hb_001416_170 0.12316504 - - kinase, putative [Ricinus communis]
9 Hb_055147_020 0.125188328 - - hypothetical protein EUGRSUZ_C03837 [Eucalyptus grandis]
10 Hb_012516_030 0.1292923624 - - PREDICTED: non-specific lipid-transfer protein 2 {ECO:0000303
11 Hb_002580_020 0.1309587471 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
12 Hb_000297_220 0.1334724968 - - SAUR family protein [Theobroma cacao]
13 Hb_006834_010 0.1363147861 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000566_170 0.1410917906 transcription factor TF Family: MIKC PREDICTED: agamous-like MADS-box protein AGL9 homolog isoform X4 [Jatropha curcas]
15 Hb_000007_070 0.1411311118 - - hypothetical protein POPTR_0008s11290g [Populus trichocarpa]
16 Hb_011206_050 0.1428283127 - - hypothetical protein POPTR_0011s02840g [Populus trichocarpa]
17 Hb_000510_210 0.1515392973 - - PREDICTED: phospholipase A1-Igamma1, chloroplastic-like [Jatropha curcas]
18 Hb_081191_010 0.1563664337 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
19 Hb_014865_010 0.1693989943 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
20 Hb_000172_310 0.1713544663 - - PREDICTED: fasciclin-like arabinogalactan protein 21 [Jatropha curcas]

Gene co-expression network

sample Hb_000975_130 Hb_000975_130 Hb_000956_060 Hb_000956_060 Hb_000975_130--Hb_000956_060 Hb_003811_050 Hb_003811_050 Hb_000975_130--Hb_003811_050 Hb_005672_030 Hb_005672_030 Hb_000975_130--Hb_005672_030 Hb_000853_010 Hb_000853_010 Hb_000975_130--Hb_000853_010 Hb_000676_130 Hb_000676_130 Hb_000975_130--Hb_000676_130 Hb_004631_030 Hb_004631_030 Hb_000975_130--Hb_004631_030 Hb_000297_220 Hb_000297_220 Hb_000956_060--Hb_000297_220 Hb_000956_060--Hb_004631_030 Hb_012516_030 Hb_012516_030 Hb_000956_060--Hb_012516_030 Hb_000956_060--Hb_003811_050 Hb_000956_060--Hb_000676_130 Hb_000007_070 Hb_000007_070 Hb_003811_050--Hb_000007_070 Hb_081191_010 Hb_081191_010 Hb_003811_050--Hb_081191_010 Hb_002580_020 Hb_002580_020 Hb_003811_050--Hb_002580_020 Hb_003811_050--Hb_000676_130 Hb_005672_030--Hb_003811_050 Hb_005672_030--Hb_000956_060 Hb_005672_030--Hb_000676_130 Hb_005672_030--Hb_002580_020 Hb_005672_030--Hb_000853_010 Hb_001416_170 Hb_001416_170 Hb_000853_010--Hb_001416_170 Hb_006834_010 Hb_006834_010 Hb_000853_010--Hb_006834_010 Hb_000853_010--Hb_003811_050 Hb_000853_010--Hb_002580_020 Hb_004984_020 Hb_004984_020 Hb_000853_010--Hb_004984_020 Hb_014865_010 Hb_014865_010 Hb_000676_130--Hb_014865_010 Hb_000676_130--Hb_002580_020 Hb_004631_030--Hb_000297_220 Hb_004631_030--Hb_012516_030 Hb_000566_170 Hb_000566_170 Hb_004631_030--Hb_000566_170 Hb_000510_210 Hb_000510_210 Hb_004631_030--Hb_000510_210 Hb_002054_090 Hb_002054_090 Hb_004631_030--Hb_002054_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0175843 0.0245689 0.0875615 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0454919 0

CAGE analysis