Hb_014865_010

Information

Type -
Description -
Location Contig14865: 31096-33448
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa017366mg
description hypothetical protein
nr
ID XP_007203003.1
description hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5VS74
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa017366mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12276: 32252-32803 , PASA_asmbl_12277: 33226-33733
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_014865_010 0.0 - - hypothetical protein PRUPE_ppa017366mg, partial [Prunus persica]
2 Hb_001242_020 0.0763964115 - - hypothetical protein JCGZ_08334 [Jatropha curcas]
3 Hb_000676_130 0.0870623151 - - PREDICTED: peroxidase 72-like [Nelumbo nucifera]
4 Hb_002437_010 0.0912377823 - - PREDICTED: uncharacterized protein LOC105123193 [Populus euphratica]
5 Hb_009780_110 0.1225167235 - - PREDICTED: protein RSI-1 [Cicer arietinum]
6 Hb_001596_030 0.1279904209 - - PREDICTED: uncharacterized protein LOC105141672 [Populus euphratica]
7 Hb_000993_020 0.1284196584 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
8 Hb_000417_350 0.1331396242 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000705_110 0.1356647355 - - hypothetical protein POPTR_0005s09220g [Populus trichocarpa]
10 Hb_001633_120 0.1367124012 - - PREDICTED: uncharacterized protein LOC105630199 [Jatropha curcas]
11 Hb_006834_010 0.141533815 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002580_020 0.1415385291 - - hypothetical protein JCGZ_19971 [Jatropha curcas]
13 Hb_000853_010 0.1425072796 - - Pectinesterase-3 precursor, putative [Ricinus communis]
14 Hb_129637_010 0.1429102683 - - PREDICTED: alpha-mannosidase isoform X1 [Populus euphratica]
15 Hb_009711_040 0.1474929477 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
16 Hb_000306_050 0.1490705189 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
17 Hb_003811_050 0.1498981918 - - hypothetical protein JCGZ_01310 [Jatropha curcas]
18 Hb_000956_060 0.154905236 transcription factor TF Family: bHLH conserved hypothetical protein [Ricinus communis]
19 Hb_081191_010 0.1607165593 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
20 Hb_161346_010 0.1612636545 - - PREDICTED: germin-like protein subfamily 1 member 20 [Populus euphratica]

Gene co-expression network

sample Hb_014865_010 Hb_014865_010 Hb_001242_020 Hb_001242_020 Hb_014865_010--Hb_001242_020 Hb_000676_130 Hb_000676_130 Hb_014865_010--Hb_000676_130 Hb_002437_010 Hb_002437_010 Hb_014865_010--Hb_002437_010 Hb_009780_110 Hb_009780_110 Hb_014865_010--Hb_009780_110 Hb_001596_030 Hb_001596_030 Hb_014865_010--Hb_001596_030 Hb_000993_020 Hb_000993_020 Hb_014865_010--Hb_000993_020 Hb_001242_020--Hb_002437_010 Hb_000540_030 Hb_000540_030 Hb_001242_020--Hb_000540_030 Hb_001242_020--Hb_001596_030 Hb_001633_120 Hb_001633_120 Hb_001242_020--Hb_001633_120 Hb_001242_020--Hb_009780_110 Hb_000956_060 Hb_000956_060 Hb_000676_130--Hb_000956_060 Hb_003811_050 Hb_003811_050 Hb_000676_130--Hb_003811_050 Hb_002580_020 Hb_002580_020 Hb_000676_130--Hb_002580_020 Hb_000975_130 Hb_000975_130 Hb_000676_130--Hb_000975_130 Hb_005672_030 Hb_005672_030 Hb_000676_130--Hb_005672_030 Hb_002437_010--Hb_001633_120 Hb_002437_010--Hb_000993_020 Hb_002437_010--Hb_000676_130 Hb_000979_080 Hb_000979_080 Hb_002437_010--Hb_000979_080 Hb_009780_110--Hb_000676_130 Hb_161346_010 Hb_161346_010 Hb_009780_110--Hb_161346_010 Hb_003090_230 Hb_003090_230 Hb_009780_110--Hb_003090_230 Hb_009780_110--Hb_002437_010 Hb_081282_010 Hb_081282_010 Hb_001596_030--Hb_081282_010 Hb_000306_050 Hb_000306_050 Hb_001596_030--Hb_000306_050 Hb_021418_010 Hb_021418_010 Hb_001596_030--Hb_021418_010 Hb_001596_030--Hb_000540_030 Hb_020805_110 Hb_020805_110 Hb_001596_030--Hb_020805_110 Hb_003768_110 Hb_003768_110 Hb_000993_020--Hb_003768_110 Hb_001623_400 Hb_001623_400 Hb_000993_020--Hb_001623_400 Hb_000993_020--Hb_000979_080 Hb_000417_350 Hb_000417_350 Hb_000993_020--Hb_000417_350
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.303884 0.748695 2.76799 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.95207 0

CAGE analysis