Hb_001863_520

Information

Type -
Description -
Location Contig1863: 423694-424166
Sequence    

Annotation

kegg
ID rcu:RCOM_1035170
description hypothetical protein
nr
ID XP_002513916.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJJ7
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1035170 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001863_520 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_162815_010 0.0949240774 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
3 Hb_110631_010 0.1197262697 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
4 Hb_001300_060 0.1235241683 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
5 Hb_010308_010 0.1284267138 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
6 Hb_000496_080 0.128656917 - - Proteinase inhibitor, putative [Ricinus communis]
7 Hb_004330_050 0.1291252148 - - conserved hypothetical protein [Ricinus communis]
8 Hb_030088_010 0.1309205057 - - basic blue copper family protein [Populus trichocarpa]
9 Hb_000329_570 0.1329786933 - - -
10 Hb_020112_010 0.1335944662 - - acyltransferase, putative [Ricinus communis]
11 Hb_006275_040 0.1347953513 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
12 Hb_003177_100 0.1373504218 - - PREDICTED: auxin-induced protein 6B [Jatropha curcas]
13 Hb_004397_010 0.1390397504 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_081191_010 0.1529334812 - - PREDICTED: pathogenesis-related protein PR-1-like [Jatropha curcas]
15 Hb_009615_030 0.1582920013 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
16 Hb_000743_070 0.1605513056 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
17 Hb_004785_150 0.1605614114 - - hypothetical protein JCGZ_25207 [Jatropha curcas]
18 Hb_001404_060 0.1614216121 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
19 Hb_006103_050 0.1631100674 - - -
20 Hb_023714_010 0.1632903391 - - hypothetical protein B456_007G377100 [Gossypium raimondii]

Gene co-expression network

sample Hb_001863_520 Hb_001863_520 Hb_162815_010 Hb_162815_010 Hb_001863_520--Hb_162815_010 Hb_110631_010 Hb_110631_010 Hb_001863_520--Hb_110631_010 Hb_001300_060 Hb_001300_060 Hb_001863_520--Hb_001300_060 Hb_010308_010 Hb_010308_010 Hb_001863_520--Hb_010308_010 Hb_000496_080 Hb_000496_080 Hb_001863_520--Hb_000496_080 Hb_004330_050 Hb_004330_050 Hb_001863_520--Hb_004330_050 Hb_030088_010 Hb_030088_010 Hb_162815_010--Hb_030088_010 Hb_049438_020 Hb_049438_020 Hb_162815_010--Hb_049438_020 Hb_004397_010 Hb_004397_010 Hb_162815_010--Hb_004397_010 Hb_001856_260 Hb_001856_260 Hb_162815_010--Hb_001856_260 Hb_120357_010 Hb_120357_010 Hb_162815_010--Hb_120357_010 Hb_000320_240 Hb_000320_240 Hb_110631_010--Hb_000320_240 Hb_000506_050 Hb_000506_050 Hb_110631_010--Hb_000506_050 Hb_000086_510 Hb_000086_510 Hb_110631_010--Hb_000086_510 Hb_001404_060 Hb_001404_060 Hb_110631_010--Hb_001404_060 Hb_165110_010 Hb_165110_010 Hb_110631_010--Hb_165110_010 Hb_001300_060--Hb_010308_010 Hb_001300_060--Hb_000496_080 Hb_001300_060--Hb_004330_050 Hb_000329_570 Hb_000329_570 Hb_001300_060--Hb_000329_570 Hb_020112_010 Hb_020112_010 Hb_001300_060--Hb_020112_010 Hb_006275_040 Hb_006275_040 Hb_001300_060--Hb_006275_040 Hb_010308_010--Hb_000496_080 Hb_010308_010--Hb_004330_050 Hb_010308_010--Hb_020112_010 Hb_010308_010--Hb_000329_570 Hb_000743_070 Hb_000743_070 Hb_010308_010--Hb_000743_070 Hb_000496_080--Hb_004330_050 Hb_000496_080--Hb_020112_010 Hb_000496_080--Hb_000329_570 Hb_000496_080--Hb_000743_070 Hb_004330_050--Hb_020112_010 Hb_004330_050--Hb_000329_570 Hb_004330_050--Hb_000743_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.937213 5.55834 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.21018 0.268729

CAGE analysis