Hb_001404_060

Information

Type -
Description -
Location Contig1404: 46703-47456
Sequence    

Annotation

kegg
ID rcu:RCOM_0020950
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative (EC:2.7.11.25)
nr
ID XP_002533520.1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
swissprot
ID Q8H1D6
description Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana GN=RBK1 PE=1 SV=1
trembl
ID B9T5K1
description BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1, putative OS=Ricinus communis GN=RCOM_0020950 PE=3 SV=1
Gene Ontology
ID GO:0005622
description receptor-like cytosolic serine threonine-protein kinase rbk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001404_060 0.0 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
2 Hb_073870_010 0.0215353996 - - hypothetical protein RCOM_0725510 [Ricinus communis]
3 Hb_006103_050 0.0271616378 - - -
4 Hb_007138_010 0.0602120437 - - PREDICTED: putative laccase-9 [Jatropha curcas]
5 Hb_100953_010 0.085173377 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
6 Hb_005551_070 0.0870518568 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
7 Hb_004330_050 0.0908622286 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005389_030 0.0949537873 - - hypothetical protein VITISV_023348 [Vitis vinifera]
9 Hb_010308_010 0.0962870487 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
10 Hb_005357_040 0.0968625113 - - gibberellin 20-oxidase, putative [Ricinus communis]
11 Hb_000496_080 0.0971049116 - - Proteinase inhibitor, putative [Ricinus communis]
12 Hb_001369_510 0.1022788412 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
13 Hb_138585_070 0.10367965 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000320_240 0.1050721186 - - multicopper oxidase, putative [Ricinus communis]
15 Hb_020112_010 0.1090693336 - - acyltransferase, putative [Ricinus communis]
16 Hb_000617_160 0.1099245049 - - -
17 Hb_005144_140 0.1113758032 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000935_060 0.1115294 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
19 Hb_001300_060 0.112669255 - - PREDICTED: monothiol glutaredoxin-S6-like [Jatropha curcas]
20 Hb_004102_150 0.1151831107 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]

Gene co-expression network

sample Hb_001404_060 Hb_001404_060 Hb_073870_010 Hb_073870_010 Hb_001404_060--Hb_073870_010 Hb_006103_050 Hb_006103_050 Hb_001404_060--Hb_006103_050 Hb_007138_010 Hb_007138_010 Hb_001404_060--Hb_007138_010 Hb_100953_010 Hb_100953_010 Hb_001404_060--Hb_100953_010 Hb_005551_070 Hb_005551_070 Hb_001404_060--Hb_005551_070 Hb_004330_050 Hb_004330_050 Hb_001404_060--Hb_004330_050 Hb_073870_010--Hb_006103_050 Hb_073870_010--Hb_007138_010 Hb_073870_010--Hb_100953_010 Hb_000935_060 Hb_000935_060 Hb_073870_010--Hb_000935_060 Hb_001369_510 Hb_001369_510 Hb_073870_010--Hb_001369_510 Hb_006103_050--Hb_005551_070 Hb_006103_050--Hb_007138_010 Hb_006103_050--Hb_004330_050 Hb_010308_010 Hb_010308_010 Hb_006103_050--Hb_010308_010 Hb_007138_010--Hb_100953_010 Hb_007138_010--Hb_001369_510 Hb_005389_030 Hb_005389_030 Hb_007138_010--Hb_005389_030 Hb_005357_040 Hb_005357_040 Hb_007138_010--Hb_005357_040 Hb_100953_010--Hb_001369_510 Hb_100953_010--Hb_005389_030 Hb_100953_010--Hb_005357_040 Hb_000028_450 Hb_000028_450 Hb_100953_010--Hb_000028_450 Hb_005305_170 Hb_005305_170 Hb_005551_070--Hb_005305_170 Hb_000046_550 Hb_000046_550 Hb_005551_070--Hb_000046_550 Hb_003858_050 Hb_003858_050 Hb_005551_070--Hb_003858_050 Hb_000127_050 Hb_000127_050 Hb_005551_070--Hb_000127_050 Hb_002759_200 Hb_002759_200 Hb_005551_070--Hb_002759_200 Hb_004330_050--Hb_010308_010 Hb_000496_080 Hb_000496_080 Hb_004330_050--Hb_000496_080 Hb_020112_010 Hb_020112_010 Hb_004330_050--Hb_020112_010 Hb_001300_060 Hb_001300_060 Hb_004330_050--Hb_001300_060 Hb_000329_570 Hb_000329_570 Hb_004330_050--Hb_000329_570 Hb_000743_070 Hb_000743_070 Hb_004330_050--Hb_000743_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0592893 0.234029 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0597884 0

CAGE analysis