Hb_073870_010

Information

Type -
Description -
Location Contig73870: 545-865
Sequence    

Annotation

kegg
ID rcu:RCOM_0725510
description hypothetical protein
nr
ID XP_002524903.1
description hypothetical protein RCOM_0725510 [Ricinus communis]
swissprot
ID Q3ECH2
description Probable receptor-like protein kinase At1g67000 OS=Arabidopsis thaliana GN=At1g67000 PE=2 SV=2
trembl
ID B9SFY4
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0725510 PE=4 SV=1
Gene Ontology
ID GO:0005488
description probable receptor-like protein kinase at1g67000-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_073870_010 0.0 - - hypothetical protein RCOM_0725510 [Ricinus communis]
2 Hb_001404_060 0.0215353996 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
3 Hb_006103_050 0.0485791145 - - -
4 Hb_007138_010 0.0528080339 - - PREDICTED: putative laccase-9 [Jatropha curcas]
5 Hb_100953_010 0.0761291998 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
6 Hb_000935_060 0.0901410492 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
7 Hb_001369_510 0.0910880108 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
8 Hb_004102_150 0.0938068115 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
9 Hb_005389_030 0.0945941644 - - hypothetical protein VITISV_023348 [Vitis vinifera]
10 Hb_005144_140 0.094786445 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000320_240 0.1018423857 - - multicopper oxidase, putative [Ricinus communis]
12 Hb_005357_040 0.102027945 - - gibberellin 20-oxidase, putative [Ricinus communis]
13 Hb_004330_050 0.1034551743 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000917_070 0.1074546176 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005551_070 0.1082244081 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
16 Hb_010308_010 0.1084835187 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
17 Hb_000496_080 0.109431014 - - Proteinase inhibitor, putative [Ricinus communis]
18 Hb_138585_070 0.1127768666 - - conserved hypothetical protein [Ricinus communis]
19 Hb_006275_040 0.1131904839 - - PREDICTED: V-type proton ATPase subunit a3-like [Jatropha curcas]
20 Hb_000617_160 0.1193799692 - - -

Gene co-expression network

sample Hb_073870_010 Hb_073870_010 Hb_001404_060 Hb_001404_060 Hb_073870_010--Hb_001404_060 Hb_006103_050 Hb_006103_050 Hb_073870_010--Hb_006103_050 Hb_007138_010 Hb_007138_010 Hb_073870_010--Hb_007138_010 Hb_100953_010 Hb_100953_010 Hb_073870_010--Hb_100953_010 Hb_000935_060 Hb_000935_060 Hb_073870_010--Hb_000935_060 Hb_001369_510 Hb_001369_510 Hb_073870_010--Hb_001369_510 Hb_001404_060--Hb_006103_050 Hb_001404_060--Hb_007138_010 Hb_001404_060--Hb_100953_010 Hb_005551_070 Hb_005551_070 Hb_001404_060--Hb_005551_070 Hb_004330_050 Hb_004330_050 Hb_001404_060--Hb_004330_050 Hb_006103_050--Hb_005551_070 Hb_006103_050--Hb_007138_010 Hb_006103_050--Hb_004330_050 Hb_010308_010 Hb_010308_010 Hb_006103_050--Hb_010308_010 Hb_007138_010--Hb_100953_010 Hb_007138_010--Hb_001369_510 Hb_005389_030 Hb_005389_030 Hb_007138_010--Hb_005389_030 Hb_005357_040 Hb_005357_040 Hb_007138_010--Hb_005357_040 Hb_100953_010--Hb_001369_510 Hb_100953_010--Hb_005389_030 Hb_100953_010--Hb_005357_040 Hb_000028_450 Hb_000028_450 Hb_100953_010--Hb_000028_450 Hb_004102_150 Hb_004102_150 Hb_000935_060--Hb_004102_150 Hb_000926_240 Hb_000926_240 Hb_000935_060--Hb_000926_240 Hb_000917_070 Hb_000917_070 Hb_000935_060--Hb_000917_070 Hb_005144_140 Hb_005144_140 Hb_000935_060--Hb_005144_140 Hb_010068_010 Hb_010068_010 Hb_000935_060--Hb_010068_010 Hb_160479_010 Hb_160479_010 Hb_000935_060--Hb_160479_010 Hb_001369_510--Hb_005389_030 Hb_001369_510--Hb_005357_040 Hb_001369_510--Hb_000028_450 Hb_033691_010 Hb_033691_010 Hb_001369_510--Hb_033691_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.227994 0.99937 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.228359 0

CAGE analysis