Hb_000028_450

Information

Type -
Description -
Location Contig28: 408719-419105
Sequence    

Annotation

kegg
ID tcc:TCM_013181
description Alpha/beta-Hydrolases superfamily protein isoform 1
nr
ID XP_012089516.1
description PREDICTED: monoglyceride lipase-like [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JH54
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00336 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000028_450 0.0 - - PREDICTED: monoglyceride lipase-like [Jatropha curcas]
2 Hb_002217_400 0.0100614698 - - polynucleotidyl transferase, ribonuclease H-like protein [Arabidopsis thaliana]
3 Hb_005357_040 0.0204898851 - - gibberellin 20-oxidase, putative [Ricinus communis]
4 Hb_003082_090 0.0259929551 - - hypothetical protein POPTR_0013s099451g, partial [Populus trichocarpa]
5 Hb_138585_070 0.0310737175 - - conserved hypothetical protein [Ricinus communis]
6 Hb_005389_030 0.0319840182 - - hypothetical protein VITISV_023348 [Vitis vinifera]
7 Hb_000617_160 0.0325796293 - - -
8 Hb_000732_200 0.0432868296 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000984_280 0.0676705774 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas]
10 Hb_100953_010 0.0707849854 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
11 Hb_004598_020 0.0761408415 transcription factor TF Family: ERF Transcriptional factor TINY, putative [Ricinus communis]
12 Hb_007138_010 0.076176872 - - PREDICTED: putative laccase-9 [Jatropha curcas]
13 Hb_180864_010 0.0772223595 - - hypothetical protein B456_010G097000 [Gossypium raimondii]
14 Hb_001242_170 0.0795377424 - - conserved hypothetical protein [Ricinus communis]
15 Hb_001369_510 0.0800532071 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
16 Hb_163989_010 0.0855169909 - - conserved hypothetical protein [Ricinus communis]
17 Hb_085600_010 0.0955207805 - - PREDICTED: peroxidase 24-like [Jatropha curcas]
18 Hb_070266_010 0.0970196448 - - LRR.XII-like protein, partial [Platanus x acerifolia]
19 Hb_002641_090 0.0988968811 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
20 Hb_000504_060 0.106252441 - - Cell division cycle protein cdt2, putative [Ricinus communis]

Gene co-expression network

sample Hb_000028_450 Hb_000028_450 Hb_002217_400 Hb_002217_400 Hb_000028_450--Hb_002217_400 Hb_005357_040 Hb_005357_040 Hb_000028_450--Hb_005357_040 Hb_003082_090 Hb_003082_090 Hb_000028_450--Hb_003082_090 Hb_138585_070 Hb_138585_070 Hb_000028_450--Hb_138585_070 Hb_005389_030 Hb_005389_030 Hb_000028_450--Hb_005389_030 Hb_000617_160 Hb_000617_160 Hb_000028_450--Hb_000617_160 Hb_002217_400--Hb_003082_090 Hb_002217_400--Hb_005357_040 Hb_002217_400--Hb_000617_160 Hb_002217_400--Hb_138585_070 Hb_000732_200 Hb_000732_200 Hb_002217_400--Hb_000732_200 Hb_005357_040--Hb_138585_070 Hb_005357_040--Hb_005389_030 Hb_005357_040--Hb_000617_160 Hb_005357_040--Hb_000732_200 Hb_003082_090--Hb_005357_040 Hb_003082_090--Hb_005389_030 Hb_004598_020 Hb_004598_020 Hb_003082_090--Hb_004598_020 Hb_003082_090--Hb_000617_160 Hb_138585_070--Hb_000617_160 Hb_138585_070--Hb_000732_200 Hb_138585_070--Hb_005389_030 Hb_100953_010 Hb_100953_010 Hb_005389_030--Hb_100953_010 Hb_005389_030--Hb_002217_400 Hb_007138_010 Hb_007138_010 Hb_005389_030--Hb_007138_010 Hb_000617_160--Hb_000732_200 Hb_000984_280 Hb_000984_280 Hb_000617_160--Hb_000984_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0952758 0.229861 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0375543 0

CAGE analysis