Hb_100953_010

Information

Type -
Description -
Location Contig100953: 175-486
Sequence    

Annotation

kegg
ID cic:CICLE_v10006443mg
description hypothetical protein
nr
ID KDP36058.1
description hypothetical protein JCGZ_10310 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KM16
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10310 PE=4 SV=1
Gene Ontology
ID GO:0043531
description disease resistance protein rga1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_100953_010 0.0 - - hypothetical protein JCGZ_10310 [Jatropha curcas]
2 Hb_001369_510 0.0192667727 - - PREDICTED: uncharacterized protein LOC105766768 [Gossypium raimondii]
3 Hb_007138_010 0.0251936822 - - PREDICTED: putative laccase-9 [Jatropha curcas]
4 Hb_005389_030 0.0391227671 - - hypothetical protein VITISV_023348 [Vitis vinifera]
5 Hb_005357_040 0.0628323058 - - gibberellin 20-oxidase, putative [Ricinus communis]
6 Hb_000028_450 0.0707849854 - - PREDICTED: monoglyceride lipase-like [Jatropha curcas]
7 Hb_073870_010 0.0761291998 - - hypothetical protein RCOM_0725510 [Ricinus communis]
8 Hb_002217_400 0.0805815641 - - polynucleotidyl transferase, ribonuclease H-like protein [Arabidopsis thaliana]
9 Hb_003082_090 0.0840201209 - - hypothetical protein POPTR_0013s099451g, partial [Populus trichocarpa]
10 Hb_138585_070 0.0841918963 - - conserved hypothetical protein [Ricinus communis]
11 Hb_001404_060 0.085173377 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
12 Hb_163989_010 0.0871707549 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000617_160 0.0902167184 - - -
14 Hb_000935_060 0.0938266339 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
15 Hb_002641_090 0.0938826085 - - PREDICTED: uncharacterized protein LOC105643559 [Jatropha curcas]
16 Hb_033691_010 0.09915 - - Lignin-forming anionic peroxidase precursor, putative [Ricinus communis]
17 Hb_006103_050 0.0993002406 - - -
18 Hb_000320_240 0.1019976855 - - multicopper oxidase, putative [Ricinus communis]
19 Hb_004102_150 0.105290329 - - Late embryogenesis abundant protein D-7, putative [Ricinus communis]
20 Hb_000732_200 0.1054597267 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_100953_010 Hb_100953_010 Hb_001369_510 Hb_001369_510 Hb_100953_010--Hb_001369_510 Hb_007138_010 Hb_007138_010 Hb_100953_010--Hb_007138_010 Hb_005389_030 Hb_005389_030 Hb_100953_010--Hb_005389_030 Hb_005357_040 Hb_005357_040 Hb_100953_010--Hb_005357_040 Hb_000028_450 Hb_000028_450 Hb_100953_010--Hb_000028_450 Hb_073870_010 Hb_073870_010 Hb_100953_010--Hb_073870_010 Hb_001369_510--Hb_007138_010 Hb_001369_510--Hb_005389_030 Hb_001369_510--Hb_005357_040 Hb_001369_510--Hb_000028_450 Hb_033691_010 Hb_033691_010 Hb_001369_510--Hb_033691_010 Hb_007138_010--Hb_005389_030 Hb_007138_010--Hb_073870_010 Hb_001404_060 Hb_001404_060 Hb_007138_010--Hb_001404_060 Hb_007138_010--Hb_005357_040 Hb_005389_030--Hb_005357_040 Hb_005389_030--Hb_000028_450 Hb_002217_400 Hb_002217_400 Hb_005389_030--Hb_002217_400 Hb_138585_070 Hb_138585_070 Hb_005389_030--Hb_138585_070 Hb_005357_040--Hb_000028_450 Hb_005357_040--Hb_138585_070 Hb_000617_160 Hb_000617_160 Hb_005357_040--Hb_000617_160 Hb_005357_040--Hb_002217_400 Hb_000732_200 Hb_000732_200 Hb_005357_040--Hb_000732_200 Hb_000028_450--Hb_002217_400 Hb_003082_090 Hb_003082_090 Hb_000028_450--Hb_003082_090 Hb_000028_450--Hb_138585_070 Hb_000028_450--Hb_000617_160 Hb_073870_010--Hb_001404_060 Hb_006103_050 Hb_006103_050 Hb_073870_010--Hb_006103_050 Hb_000935_060 Hb_000935_060 Hb_073870_010--Hb_000935_060 Hb_073870_010--Hb_001369_510
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.23514 0.850895 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.123207 0

CAGE analysis