Hb_005551_070

Information

Type -
Description -
Location Contig5551: 67962-69446
Sequence    

Annotation

kegg
ID rcu:RCOM_0437740
description hypothetical protein
nr
ID XP_012074332.1
description PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KWA5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08768 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005551_070 0.0 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
2 Hb_005305_170 0.0347387766 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
3 Hb_000046_550 0.0461790857 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
4 Hb_006103_050 0.059993121 - - -
5 Hb_003858_050 0.0776570498 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
6 Hb_000127_050 0.0835355333 - - -
7 Hb_002759_200 0.0854231203 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
8 Hb_001404_060 0.0870518568 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
9 Hb_138585_070 0.0956843314 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000617_160 0.097611237 - - -
11 Hb_000732_200 0.0995914426 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004330_050 0.1012373823 - - conserved hypothetical protein [Ricinus communis]
13 Hb_020112_010 0.1038511684 - - acyltransferase, putative [Ricinus communis]
14 Hb_000504_060 0.1042579852 - - Cell division cycle protein cdt2, putative [Ricinus communis]
15 Hb_000496_080 0.1057860764 - - Proteinase inhibitor, putative [Ricinus communis]
16 Hb_010308_010 0.1059127139 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
17 Hb_005357_040 0.1076751224 - - gibberellin 20-oxidase, putative [Ricinus communis]
18 Hb_073870_010 0.1082244081 - - hypothetical protein RCOM_0725510 [Ricinus communis]
19 Hb_000743_070 0.1094112498 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
20 Hb_000984_280 0.1188028434 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas]

Gene co-expression network

sample Hb_005551_070 Hb_005551_070 Hb_005305_170 Hb_005305_170 Hb_005551_070--Hb_005305_170 Hb_000046_550 Hb_000046_550 Hb_005551_070--Hb_000046_550 Hb_006103_050 Hb_006103_050 Hb_005551_070--Hb_006103_050 Hb_003858_050 Hb_003858_050 Hb_005551_070--Hb_003858_050 Hb_000127_050 Hb_000127_050 Hb_005551_070--Hb_000127_050 Hb_002759_200 Hb_002759_200 Hb_005551_070--Hb_002759_200 Hb_005305_170--Hb_000046_550 Hb_005305_170--Hb_003858_050 Hb_005305_170--Hb_002759_200 Hb_005305_170--Hb_000127_050 Hb_005305_170--Hb_006103_050 Hb_000046_550--Hb_003858_050 Hb_000046_550--Hb_000127_050 Hb_000046_550--Hb_002759_200 Hb_000743_070 Hb_000743_070 Hb_000046_550--Hb_000743_070 Hb_001404_060 Hb_001404_060 Hb_006103_050--Hb_001404_060 Hb_073870_010 Hb_073870_010 Hb_006103_050--Hb_073870_010 Hb_007138_010 Hb_007138_010 Hb_006103_050--Hb_007138_010 Hb_004330_050 Hb_004330_050 Hb_006103_050--Hb_004330_050 Hb_010308_010 Hb_010308_010 Hb_006103_050--Hb_010308_010 Hb_003858_050--Hb_000127_050 Hb_003858_050--Hb_002759_200 Hb_004116_090 Hb_004116_090 Hb_003858_050--Hb_004116_090 Hb_000127_050--Hb_000743_070 Hb_160814_010 Hb_160814_010 Hb_000127_050--Hb_160814_010 Hb_000504_060 Hb_000504_060 Hb_002759_200--Hb_000504_060 Hb_000984_280 Hb_000984_280 Hb_002759_200--Hb_000984_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0332076 0.0825832 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0306497 0

CAGE analysis