Hb_002759_200

Information

Type -
Description -
Location Contig2759: 204086-206141
Sequence    

Annotation

kegg
ID rcu:RCOM_0699910
description IAA-amino acid hydrolase ILR1 precursor, putative (EC:3.5.1.32)
nr
ID XP_012092031.1
description PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
swissprot
ID O04373
description IAA-amino acid hydrolase ILR1-like 4 OS=Arabidopsis thaliana GN=ILL4 PE=1 SV=2
trembl
ID A0A067JMR4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21766 PE=4 SV=1
Gene Ontology
ID GO:0016787
description iaa-amino acid hydrolase ilr1-like 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002759_200 0.0 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
2 Hb_000504_060 0.0406064181 - - Cell division cycle protein cdt2, putative [Ricinus communis]
3 Hb_005305_170 0.0652840277 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
4 Hb_003858_050 0.0693012641 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
5 Hb_000046_550 0.0701119768 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
6 Hb_000984_280 0.0827962631 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas]
7 Hb_005551_070 0.0854231203 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
8 Hb_000732_200 0.0909187762 - - conserved hypothetical protein [Ricinus communis]
9 Hb_085600_010 0.0938443382 - - PREDICTED: peroxidase 24-like [Jatropha curcas]
10 Hb_001242_170 0.0980607513 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000617_160 0.1018493083 - - -
12 Hb_138585_070 0.1056614687 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004116_090 0.1105095836 - - -
14 Hb_046615_040 0.1199946802 - - unnamed protein product [Vitis vinifera]
15 Hb_180864_010 0.1212181975 - - hypothetical protein B456_010G097000 [Gossypium raimondii]
16 Hb_000127_050 0.1252791463 - - -
17 Hb_005357_040 0.1273205634 - - gibberellin 20-oxidase, putative [Ricinus communis]
18 Hb_002766_070 0.127371391 transcription factor TF Family: MYB hypothetical protein JCGZ_17894 [Jatropha curcas]
19 Hb_002217_400 0.1296666702 - - polynucleotidyl transferase, ribonuclease H-like protein [Arabidopsis thaliana]
20 Hb_185666_010 0.1333941496 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3 [Jatropha curcas]

Gene co-expression network

sample Hb_002759_200 Hb_002759_200 Hb_000504_060 Hb_000504_060 Hb_002759_200--Hb_000504_060 Hb_005305_170 Hb_005305_170 Hb_002759_200--Hb_005305_170 Hb_003858_050 Hb_003858_050 Hb_002759_200--Hb_003858_050 Hb_000046_550 Hb_000046_550 Hb_002759_200--Hb_000046_550 Hb_000984_280 Hb_000984_280 Hb_002759_200--Hb_000984_280 Hb_005551_070 Hb_005551_070 Hb_002759_200--Hb_005551_070 Hb_000504_060--Hb_000984_280 Hb_085600_010 Hb_085600_010 Hb_000504_060--Hb_085600_010 Hb_001242_170 Hb_001242_170 Hb_000504_060--Hb_001242_170 Hb_000732_200 Hb_000732_200 Hb_000504_060--Hb_000732_200 Hb_000617_160 Hb_000617_160 Hb_000504_060--Hb_000617_160 Hb_005305_170--Hb_000046_550 Hb_005305_170--Hb_005551_070 Hb_005305_170--Hb_003858_050 Hb_000127_050 Hb_000127_050 Hb_005305_170--Hb_000127_050 Hb_006103_050 Hb_006103_050 Hb_005305_170--Hb_006103_050 Hb_003858_050--Hb_000046_550 Hb_003858_050--Hb_000127_050 Hb_004116_090 Hb_004116_090 Hb_003858_050--Hb_004116_090 Hb_003858_050--Hb_005551_070 Hb_000046_550--Hb_005551_070 Hb_000046_550--Hb_000127_050 Hb_000743_070 Hb_000743_070 Hb_000046_550--Hb_000743_070 Hb_000984_280--Hb_001242_170 Hb_000984_280--Hb_000732_200 Hb_000984_280--Hb_085600_010 Hb_180864_010 Hb_180864_010 Hb_000984_280--Hb_180864_010 Hb_000984_280--Hb_000617_160 Hb_005551_070--Hb_006103_050 Hb_005551_070--Hb_000127_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0324626 0.050652 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0197209 0

CAGE analysis