Hb_005305_170

Information

Type -
Description -
Location Contig5305: 89517-91389
Sequence    

Annotation

kegg
ID rcu:RCOM_1578380
description transferase, transferring glycosyl groups, putative (EC:2.4.1.134)
nr
ID XP_012090708.1
description PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
swissprot
ID Q9C809
description Probable beta-1,3-galactosyltransferase 8 OS=Arabidopsis thaliana GN=B3GALT8 PE=2 SV=1
trembl
ID A0A067JE55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25938 PE=4 SV=1
Gene Ontology
ID GO:0005794
description probable beta- -galactosyltransferase 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005305_170 0.0 - - PREDICTED: probable beta-1,3-galactosyltransferase 8 [Jatropha curcas]
2 Hb_000046_550 0.0137021752 - - PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Jatropha curcas]
3 Hb_005551_070 0.0347387766 - - PREDICTED: uncharacterized protein LOC105635822 isoform X1 [Jatropha curcas]
4 Hb_003858_050 0.0432750861 - - hypothetical protein PRUPE_ppa021882mg [Prunus persica]
5 Hb_002759_200 0.0652840277 - - PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Jatropha curcas]
6 Hb_000127_050 0.067746227 - - -
7 Hb_006103_050 0.0945453785 - - -
8 Hb_000504_060 0.0957130572 - - Cell division cycle protein cdt2, putative [Ricinus communis]
9 Hb_000743_070 0.1072296348 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_21060 [Jatropha curcas]
10 Hb_000732_200 0.1122412914 - - conserved hypothetical protein [Ricinus communis]
11 Hb_138585_070 0.1148097475 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000617_160 0.1148420222 - - -
13 Hb_004116_090 0.1155531738 - - -
14 Hb_020112_010 0.1181539226 - - acyltransferase, putative [Ricinus communis]
15 Hb_004330_050 0.1213664518 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001404_060 0.121573522 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
17 Hb_000984_280 0.1227466056 - - PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Jatropha curcas]
18 Hb_000496_080 0.1246541652 - - Proteinase inhibitor, putative [Ricinus communis]
19 Hb_010308_010 0.1250665358 - - hypothetical protein JCGZ_22818 [Jatropha curcas]
20 Hb_005357_040 0.1309105759 - - gibberellin 20-oxidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_005305_170 Hb_005305_170 Hb_000046_550 Hb_000046_550 Hb_005305_170--Hb_000046_550 Hb_005551_070 Hb_005551_070 Hb_005305_170--Hb_005551_070 Hb_003858_050 Hb_003858_050 Hb_005305_170--Hb_003858_050 Hb_002759_200 Hb_002759_200 Hb_005305_170--Hb_002759_200 Hb_000127_050 Hb_000127_050 Hb_005305_170--Hb_000127_050 Hb_006103_050 Hb_006103_050 Hb_005305_170--Hb_006103_050 Hb_000046_550--Hb_003858_050 Hb_000046_550--Hb_005551_070 Hb_000046_550--Hb_000127_050 Hb_000046_550--Hb_002759_200 Hb_000743_070 Hb_000743_070 Hb_000046_550--Hb_000743_070 Hb_005551_070--Hb_006103_050 Hb_005551_070--Hb_003858_050 Hb_005551_070--Hb_000127_050 Hb_005551_070--Hb_002759_200 Hb_003858_050--Hb_000127_050 Hb_003858_050--Hb_002759_200 Hb_004116_090 Hb_004116_090 Hb_003858_050--Hb_004116_090 Hb_000504_060 Hb_000504_060 Hb_002759_200--Hb_000504_060 Hb_000984_280 Hb_000984_280 Hb_002759_200--Hb_000984_280 Hb_000127_050--Hb_000743_070 Hb_160814_010 Hb_160814_010 Hb_000127_050--Hb_160814_010 Hb_001404_060 Hb_001404_060 Hb_006103_050--Hb_001404_060 Hb_073870_010 Hb_073870_010 Hb_006103_050--Hb_073870_010 Hb_007138_010 Hb_007138_010 Hb_006103_050--Hb_007138_010 Hb_004330_050 Hb_004330_050 Hb_006103_050--Hb_004330_050 Hb_010308_010 Hb_010308_010 Hb_006103_050--Hb_010308_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0141892 0.0297898 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0129546 0

CAGE analysis