Hb_007161_020

Information

Type -
Description -
Location Contig7161: 19237-22641
Sequence    

Annotation

kegg
ID rcu:RCOM_0777790
description serine/threonine-protein kinase bri1, putative (EC:2.7.11.30 1.3.1.74)
nr
ID XP_012072390.1
description PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
swissprot
ID Q9ZPS9
description Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1
trembl
ID A0A067KPQ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04829 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine threonine-protein kinase bri1-like 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55447: 21855-22195 , PASA_asmbl_55448: 22213-22689
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007161_020 0.0 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
2 Hb_113945_010 0.0996469238 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
3 Hb_170861_010 0.1086730759 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
4 Hb_000106_060 0.1109945523 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
5 Hb_000429_030 0.1140070476 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
6 Hb_039096_010 0.1225159263 - - unknown [Populus trichocarpa]
7 Hb_080068_010 0.124967855 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
8 Hb_003371_040 0.1336507359 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
9 Hb_008727_040 0.1396085333 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000934_180 0.1405981197 - - hypothetical protein JCGZ_25237 [Jatropha curcas]
11 Hb_002876_190 0.1409356225 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
12 Hb_029866_080 0.1422388882 - - PREDICTED: probable inactive receptor kinase At4g23740 [Jatropha curcas]
13 Hb_120357_010 0.1434326235 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_000011_320 0.146561369 - - PREDICTED: uncharacterized protein LOC105631328 [Jatropha curcas]
15 Hb_003964_060 0.1475206168 - - PREDICTED: beta-glucosidase 40 [Jatropha curcas]
16 Hb_003304_090 0.1477379607 - - PREDICTED: uncharacterized protein LOC105633680 [Jatropha curcas]
17 Hb_000561_040 0.1485759053 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
18 Hb_001775_130 0.1550408688 - - Prephenate dehydratase [Hevea brasiliensis]
19 Hb_000749_160 0.1563873602 - - calmodulin binding protein, putative [Ricinus communis]
20 Hb_000011_380 0.1566453905 - - PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SBT1.6 [Jatropha curcas]

Gene co-expression network

sample Hb_007161_020 Hb_007161_020 Hb_113945_010 Hb_113945_010 Hb_007161_020--Hb_113945_010 Hb_170861_010 Hb_170861_010 Hb_007161_020--Hb_170861_010 Hb_000106_060 Hb_000106_060 Hb_007161_020--Hb_000106_060 Hb_000429_030 Hb_000429_030 Hb_007161_020--Hb_000429_030 Hb_039096_010 Hb_039096_010 Hb_007161_020--Hb_039096_010 Hb_080068_010 Hb_080068_010 Hb_007161_020--Hb_080068_010 Hb_113945_010--Hb_170861_010 Hb_113945_010--Hb_000106_060 Hb_113945_010--Hb_039096_010 Hb_000934_180 Hb_000934_180 Hb_113945_010--Hb_000934_180 Hb_002876_190 Hb_002876_190 Hb_113945_010--Hb_002876_190 Hb_170861_010--Hb_000106_060 Hb_170861_010--Hb_000934_180 Hb_170861_010--Hb_039096_010 Hb_120357_010 Hb_120357_010 Hb_170861_010--Hb_120357_010 Hb_170861_010--Hb_002876_190 Hb_000106_060--Hb_039096_010 Hb_000106_060--Hb_000934_180 Hb_000106_060--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_000106_060--Hb_001775_130 Hb_003371_040 Hb_003371_040 Hb_000429_030--Hb_003371_040 Hb_003171_070 Hb_003171_070 Hb_000429_030--Hb_003171_070 Hb_081191_010 Hb_081191_010 Hb_000429_030--Hb_081191_010 Hb_000429_030--Hb_170861_010 Hb_009615_030 Hb_009615_030 Hb_000429_030--Hb_009615_030 Hb_039096_010--Hb_002876_190 Hb_039096_010--Hb_001775_130 Hb_039096_010--Hb_000934_180 Hb_080068_010--Hb_113945_010 Hb_004241_050 Hb_004241_050 Hb_080068_010--Hb_004241_050 Hb_016120_020 Hb_016120_020 Hb_080068_010--Hb_016120_020 Hb_080068_010--Hb_003371_040 Hb_080068_010--Hb_000106_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0971802 0.66689 0.414601 5.18344 0.0321482 0.0102913
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0126839 0 0 2.47659 0.597599

CAGE analysis