Hb_016120_020

Information

Type -
Description -
Location Contig16120: 15755-17398
Sequence    

Annotation

kegg
ID rcu:RCOM_1335930
description Reticuline oxidase precursor, putative (EC:1.21.3.3)
nr
ID XP_012074126.1
description PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
swissprot
ID Q8GTB6
description Tetrahydrocannabinolic acid synthase OS=Cannabis sativa PE=1 SV=1
trembl
ID A0A067KMX4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09758 PE=4 SV=1
Gene Ontology
ID GO:0008762
description tetrahydrocannabinolic acid synthase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_016120_020 0.0 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
2 Hb_003504_010 0.0827513194 - - hypothetical protein POPTR_0013s04290g [Populus trichocarpa]
3 Hb_000856_250 0.0966303199 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
4 Hb_001610_060 0.1103488197 - - hypothetical protein TRIUR3_12067 [Triticum urartu]
5 Hb_001115_010 0.1156183887 - - PREDICTED: 4-coumarate--CoA ligase 2-like [Jatropha curcas]
6 Hb_002374_060 0.1260910979 - - amino acid transporter, putative [Ricinus communis]
7 Hb_000032_340 0.1346497057 - - PREDICTED: uncharacterized protein LOC105645669 [Jatropha curcas]
8 Hb_080068_010 0.1350057667 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
9 Hb_000203_150 0.1377551678 - - PREDICTED: uncharacterized protein LOC105116038 [Populus euphratica]
10 Hb_000720_060 0.1388611117 - - PREDICTED: BON1-associated protein 2-like [Jatropha curcas]
11 Hb_000616_100 0.1517155064 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_001775_060 0.1520590372 - - conserved hypothetical protein [Ricinus communis]
13 Hb_010162_010 0.1547077463 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
14 Hb_001013_060 0.1573447919 - - -
15 Hb_110854_010 0.1612125204 - - -
16 Hb_000897_010 0.1623921533 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
17 Hb_004241_050 0.1650104756 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
18 Hb_007161_020 0.1652081343 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
19 Hb_000069_630 0.1661712209 - - hypothetical protein [Hevea brasiliensis]
20 Hb_003371_040 0.166577548 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]

Gene co-expression network

sample Hb_016120_020 Hb_016120_020 Hb_003504_010 Hb_003504_010 Hb_016120_020--Hb_003504_010 Hb_000856_250 Hb_000856_250 Hb_016120_020--Hb_000856_250 Hb_001610_060 Hb_001610_060 Hb_016120_020--Hb_001610_060 Hb_001115_010 Hb_001115_010 Hb_016120_020--Hb_001115_010 Hb_002374_060 Hb_002374_060 Hb_016120_020--Hb_002374_060 Hb_000032_340 Hb_000032_340 Hb_016120_020--Hb_000032_340 Hb_003504_010--Hb_000856_250 Hb_003504_010--Hb_001610_060 Hb_000897_010 Hb_000897_010 Hb_003504_010--Hb_000897_010 Hb_001775_060 Hb_001775_060 Hb_003504_010--Hb_001775_060 Hb_003504_010--Hb_001115_010 Hb_000856_250--Hb_000032_340 Hb_000070_070 Hb_000070_070 Hb_000856_250--Hb_000070_070 Hb_010417_090 Hb_010417_090 Hb_000856_250--Hb_010417_090 Hb_000203_150 Hb_000203_150 Hb_000856_250--Hb_000203_150 Hb_002236_010 Hb_002236_010 Hb_000856_250--Hb_002236_010 Hb_001610_060--Hb_000203_150 Hb_001013_060 Hb_001013_060 Hb_001610_060--Hb_001013_060 Hb_000720_060 Hb_000720_060 Hb_001610_060--Hb_000720_060 Hb_001610_060--Hb_000032_340 Hb_001610_060--Hb_000856_250 Hb_004241_050 Hb_004241_050 Hb_001115_010--Hb_004241_050 Hb_128582_010 Hb_128582_010 Hb_001115_010--Hb_128582_010 Hb_080068_010 Hb_080068_010 Hb_001115_010--Hb_080068_010 Hb_002054_090 Hb_002054_090 Hb_001115_010--Hb_002054_090 Hb_000676_170 Hb_000676_170 Hb_002374_060--Hb_000676_170 Hb_010162_010 Hb_010162_010 Hb_002374_060--Hb_010162_010 Hb_001006_030 Hb_001006_030 Hb_002374_060--Hb_001006_030 Hb_000069_520 Hb_000069_520 Hb_002374_060--Hb_000069_520 Hb_002374_060--Hb_000856_250 Hb_000032_340--Hb_000203_150 Hb_000032_340--Hb_000069_520 Hb_000032_340--Hb_010417_090 Hb_183209_020 Hb_183209_020 Hb_000032_340--Hb_183209_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0894734 28.3668 6.72254 118.68 0.058651 0.0596109
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.5343 1.21685 1.79336 39.3055 8.50108

CAGE analysis