Hb_080068_010

Information

Type -
Description -
Location Contig80068: 1-342
Sequence    

Annotation

kegg
ID pop:POPTR_0002s05580g
description POPTRDRAFT_643329; hypothetical protein
nr
ID XP_012092270.1
description PREDICTED: basic 7S globulin-like [Jatropha curcas]
swissprot
ID P13917
description Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2
trembl
ID A0A067JN84
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21951 PE=4 SV=1
Gene Ontology
ID GO:0004190
description basic 7s globulin-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_080068_010 0.0 - - PREDICTED: basic 7S globulin-like [Jatropha curcas]
2 Hb_113945_010 0.1231539689 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
3 Hb_007161_020 0.124967855 - - PREDICTED: serine/threonine-protein kinase BRI1-like 2 [Jatropha curcas]
4 Hb_004241_050 0.1335833295 - - Indole-3-acetic acid-amido synthetase GH3.6, putative [Ricinus communis]
5 Hb_016120_020 0.1350057667 - - PREDICTED: tetrahydrocannabinolic acid synthase-like [Jatropha curcas]
6 Hb_003371_040 0.1362586811 - - PREDICTED: uncharacterized protein LOC105650327 [Jatropha curcas]
7 Hb_000106_060 0.1412248205 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
8 Hb_170861_010 0.1417157317 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
9 Hb_000429_030 0.1418741184 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
10 Hb_001115_010 0.1453669128 - - PREDICTED: 4-coumarate--CoA ligase 2-like [Jatropha curcas]
11 Hb_000098_210 0.150321023 - - PREDICTED: uncharacterized protein LOC105633345 [Jatropha curcas]
12 Hb_002054_090 0.1506403798 - - PREDICTED: 36.4 kDa proline-rich protein-like [Gossypium raimondii]
13 Hb_000856_250 0.152074999 - - short chain alcohol dehydrogenase, putative [Ricinus communis]
14 Hb_002876_190 0.1598248441 transcription factor TF Family: GRAS hypothetical protein PRUPE_ppa017519mg [Prunus persica]
15 Hb_004397_010 0.1600906214 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
16 Hb_000069_630 0.1605599091 - - hypothetical protein [Hevea brasiliensis]
17 Hb_014096_010 0.1615891957 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
18 Hb_000897_010 0.1658213669 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
19 Hb_003504_010 0.1666420733 - - hypothetical protein POPTR_0013s04290g [Populus trichocarpa]
20 Hb_001610_060 0.170483418 - - hypothetical protein TRIUR3_12067 [Triticum urartu]

Gene co-expression network

sample Hb_080068_010 Hb_080068_010 Hb_113945_010 Hb_113945_010 Hb_080068_010--Hb_113945_010 Hb_007161_020 Hb_007161_020 Hb_080068_010--Hb_007161_020 Hb_004241_050 Hb_004241_050 Hb_080068_010--Hb_004241_050 Hb_016120_020 Hb_016120_020 Hb_080068_010--Hb_016120_020 Hb_003371_040 Hb_003371_040 Hb_080068_010--Hb_003371_040 Hb_000106_060 Hb_000106_060 Hb_080068_010--Hb_000106_060 Hb_170861_010 Hb_170861_010 Hb_113945_010--Hb_170861_010 Hb_113945_010--Hb_000106_060 Hb_039096_010 Hb_039096_010 Hb_113945_010--Hb_039096_010 Hb_000934_180 Hb_000934_180 Hb_113945_010--Hb_000934_180 Hb_113945_010--Hb_007161_020 Hb_002876_190 Hb_002876_190 Hb_113945_010--Hb_002876_190 Hb_007161_020--Hb_170861_010 Hb_007161_020--Hb_000106_060 Hb_000429_030 Hb_000429_030 Hb_007161_020--Hb_000429_030 Hb_007161_020--Hb_039096_010 Hb_060236_010 Hb_060236_010 Hb_004241_050--Hb_060236_010 Hb_041063_010 Hb_041063_010 Hb_004241_050--Hb_041063_010 Hb_000059_110 Hb_000059_110 Hb_004241_050--Hb_000059_110 Hb_001115_010 Hb_001115_010 Hb_004241_050--Hb_001115_010 Hb_082733_010 Hb_082733_010 Hb_004241_050--Hb_082733_010 Hb_000563_620 Hb_000563_620 Hb_004241_050--Hb_000563_620 Hb_003504_010 Hb_003504_010 Hb_016120_020--Hb_003504_010 Hb_000856_250 Hb_000856_250 Hb_016120_020--Hb_000856_250 Hb_001610_060 Hb_001610_060 Hb_016120_020--Hb_001610_060 Hb_016120_020--Hb_001115_010 Hb_002374_060 Hb_002374_060 Hb_016120_020--Hb_002374_060 Hb_000032_340 Hb_000032_340 Hb_016120_020--Hb_000032_340 Hb_006314_020 Hb_006314_020 Hb_003371_040--Hb_006314_020 Hb_003371_040--Hb_002876_190 Hb_001775_130 Hb_001775_130 Hb_003371_040--Hb_001775_130 Hb_003371_040--Hb_000429_030 Hb_003171_070 Hb_003171_070 Hb_003371_040--Hb_003171_070 Hb_001856_150 Hb_001856_150 Hb_003371_040--Hb_001856_150 Hb_000106_060--Hb_170861_010 Hb_000106_060--Hb_039096_010 Hb_000106_060--Hb_000934_180 Hb_000106_060--Hb_002876_190 Hb_000106_060--Hb_001775_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.921338 0.278694 5.87738 0.11723 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 2.1256 0.357048

CAGE analysis