Hb_000015_190

Information

Type -
Description -
Location Contig15: 165881-166810
Sequence    

Annotation

kegg
ID rcu:RCOM_0996630
description hypothetical protein
nr
ID XP_012089431.1
description PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LCK5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01483 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000015_190 0.0 - - PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]
2 Hb_001616_100 0.111447057 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
3 Hb_000561_040 0.117610929 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
4 Hb_003001_050 0.1197006547 - - hypothetical protein RCOM_1749890 [Ricinus communis]
5 Hb_027400_020 0.1219838145 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]
6 Hb_001777_010 0.1269294415 - - -
7 Hb_000419_140 0.1303956537 - - Aquaporin PIP2.1, putative [Ricinus communis]
8 Hb_002616_020 0.1329045769 - - PREDICTED: peroxidase 3 [Jatropha curcas]
9 Hb_000076_280 0.1393420082 - - PREDICTED: pectinesterase-like [Populus euphratica]
10 Hb_001769_070 0.1394362907 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
11 Hb_000003_110 0.1421607251 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
12 Hb_002869_090 0.1424787193 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
13 Hb_000389_100 0.1432706791 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
14 Hb_000463_120 0.1498811698 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
15 Hb_000243_340 0.1499044876 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
16 Hb_002701_030 0.1502550183 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
17 Hb_002097_180 0.1522084174 - - PREDICTED: probable pectate lyase 12 isoform X1 [Jatropha curcas]
18 Hb_000017_250 0.1539557172 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
19 Hb_003607_090 0.154905097 - - PREDICTED: probable pectate lyase 8 [Jatropha curcas]
20 Hb_000329_010 0.1568092744 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Jatropha curcas]

Gene co-expression network

sample Hb_000015_190 Hb_000015_190 Hb_001616_100 Hb_001616_100 Hb_000015_190--Hb_001616_100 Hb_000561_040 Hb_000561_040 Hb_000015_190--Hb_000561_040 Hb_003001_050 Hb_003001_050 Hb_000015_190--Hb_003001_050 Hb_027400_020 Hb_027400_020 Hb_000015_190--Hb_027400_020 Hb_001777_010 Hb_001777_010 Hb_000015_190--Hb_001777_010 Hb_000419_140 Hb_000419_140 Hb_000015_190--Hb_000419_140 Hb_002304_100 Hb_002304_100 Hb_001616_100--Hb_002304_100 Hb_000157_020 Hb_000157_020 Hb_001616_100--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_001616_100--Hb_000243_340 Hb_000003_110 Hb_000003_110 Hb_001616_100--Hb_000003_110 Hb_000805_270 Hb_000805_270 Hb_001616_100--Hb_000805_270 Hb_000389_100 Hb_000389_100 Hb_000561_040--Hb_000389_100 Hb_002869_090 Hb_002869_090 Hb_000561_040--Hb_002869_090 Hb_000659_050 Hb_000659_050 Hb_000561_040--Hb_000659_050 Hb_120357_010 Hb_120357_010 Hb_000561_040--Hb_120357_010 Hb_000561_040--Hb_027400_020 Hb_049438_020 Hb_049438_020 Hb_000561_040--Hb_049438_020 Hb_001616_010 Hb_001616_010 Hb_003001_050--Hb_001616_010 Hb_003001_050--Hb_000561_040 Hb_001186_110 Hb_001186_110 Hb_003001_050--Hb_001186_110 Hb_002616_020 Hb_002616_020 Hb_003001_050--Hb_002616_020 Hb_003001_050--Hb_001616_100 Hb_000076_280 Hb_000076_280 Hb_027400_020--Hb_000076_280 Hb_027400_020--Hb_002616_020 Hb_027400_020--Hb_000419_140 Hb_001769_070 Hb_001769_070 Hb_027400_020--Hb_001769_070 Hb_027400_020--Hb_002869_090 Hb_000329_010 Hb_000329_010 Hb_027400_020--Hb_000329_010 Hb_001777_010--Hb_000419_140 Hb_001777_010--Hb_000076_280 Hb_002566_020 Hb_002566_020 Hb_001777_010--Hb_002566_020 Hb_001777_010--Hb_000329_010 Hb_009456_010 Hb_009456_010 Hb_001777_010--Hb_009456_010 Hb_001777_010--Hb_001769_070 Hb_000419_140--Hb_000076_280 Hb_000419_140--Hb_001769_070 Hb_000419_140--Hb_000329_010 Hb_000419_140--Hb_002616_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0242072 0.222697 1.31321 6.08652 0.045389 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0555161 0.0873201 0 1.86459 0.977116

CAGE analysis