Hb_001616_100

Information

Type -
Description -
Location Contig1616: 131516-133303
Sequence    

Annotation

kegg
ID rcu:RCOM_1750210
description hypothetical protein
nr
ID XP_012085073.1
description PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
swissprot
ID O74113
description Cell division control protein 45 homolog OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sna41 PE=1 SV=1
trembl
ID A0A067JQX6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17519 PE=4 SV=1
Gene Ontology
ID GO:0006270
description cell division control protein 45 homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14501: 131863-132723
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001616_100 0.0 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
2 Hb_000015_190 0.111447057 - - PREDICTED: uncharacterized protein LOC105647810 [Jatropha curcas]
3 Hb_002304_100 0.1240660861 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
4 Hb_000157_020 0.1272062038 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000243_340 0.1273972356 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
6 Hb_000003_110 0.130587689 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
7 Hb_000805_270 0.1310080546 - - PREDICTED: expansin-A4 [Gossypium raimondii]
8 Hb_000339_050 0.1321573854 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
9 Hb_000506_050 0.1342679432 - - PREDICTED: thymidine kinase [Jatropha curcas]
10 Hb_001777_010 0.1375515123 - - -
11 Hb_000419_140 0.1389261766 - - Aquaporin PIP2.1, putative [Ricinus communis]
12 Hb_000834_130 0.1418268634 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002601_040 0.1425459549 - - hypothetical protein JCGZ_06197 [Jatropha curcas]
14 Hb_000017_250 0.143145371 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
15 Hb_000334_090 0.1440469694 - - hypothetical protein JCGZ_16789 [Jatropha curcas]
16 Hb_000568_020 0.1444675197 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
17 Hb_005000_280 0.1475857639 - - PREDICTED: uncharacterized protein LOC105637905 [Jatropha curcas]
18 Hb_002900_180 0.1491339679 transcription factor TF Family: LIM LIM1 [Hevea brasiliensis]
19 Hb_001769_070 0.1502606891 transcription factor TF Family: LIM PREDICTED: LIM domain-containing protein WLIM1-like isoform X1 [Jatropha curcas]
20 Hb_027400_020 0.1512490444 - - PREDICTED: uncharacterized protein At5g22580 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_001616_100 Hb_001616_100 Hb_000015_190 Hb_000015_190 Hb_001616_100--Hb_000015_190 Hb_002304_100 Hb_002304_100 Hb_001616_100--Hb_002304_100 Hb_000157_020 Hb_000157_020 Hb_001616_100--Hb_000157_020 Hb_000243_340 Hb_000243_340 Hb_001616_100--Hb_000243_340 Hb_000003_110 Hb_000003_110 Hb_001616_100--Hb_000003_110 Hb_000805_270 Hb_000805_270 Hb_001616_100--Hb_000805_270 Hb_000561_040 Hb_000561_040 Hb_000015_190--Hb_000561_040 Hb_003001_050 Hb_003001_050 Hb_000015_190--Hb_003001_050 Hb_027400_020 Hb_027400_020 Hb_000015_190--Hb_027400_020 Hb_001777_010 Hb_001777_010 Hb_000015_190--Hb_001777_010 Hb_000419_140 Hb_000419_140 Hb_000015_190--Hb_000419_140 Hb_002304_100--Hb_000243_340 Hb_001645_030 Hb_001645_030 Hb_002304_100--Hb_001645_030 Hb_000568_020 Hb_000568_020 Hb_002304_100--Hb_000568_020 Hb_001247_090 Hb_001247_090 Hb_002304_100--Hb_001247_090 Hb_000339_050 Hb_000339_050 Hb_002304_100--Hb_000339_050 Hb_002601_040 Hb_002601_040 Hb_002304_100--Hb_002601_040 Hb_000506_050 Hb_000506_050 Hb_000157_020--Hb_000506_050 Hb_000890_120 Hb_000890_120 Hb_000157_020--Hb_000890_120 Hb_000157_020--Hb_000339_050 Hb_000086_510 Hb_000086_510 Hb_000157_020--Hb_000086_510 Hb_165110_010 Hb_165110_010 Hb_000157_020--Hb_165110_010 Hb_085829_010 Hb_085829_010 Hb_000157_020--Hb_085829_010 Hb_000243_340--Hb_002601_040 Hb_000243_340--Hb_001645_030 Hb_000243_340--Hb_000568_020 Hb_000834_130 Hb_000834_130 Hb_000243_340--Hb_000834_130 Hb_000243_340--Hb_000339_050 Hb_061222_010 Hb_061222_010 Hb_000003_110--Hb_061222_010 Hb_005784_060 Hb_005784_060 Hb_000003_110--Hb_005784_060 Hb_002900_180 Hb_002900_180 Hb_000003_110--Hb_002900_180 Hb_005253_020 Hb_005253_020 Hb_000003_110--Hb_005253_020 Hb_002292_080 Hb_002292_080 Hb_000003_110--Hb_002292_080 Hb_000805_270--Hb_000339_050 Hb_004357_030 Hb_004357_030 Hb_000805_270--Hb_004357_030 Hb_000805_270--Hb_000506_050 Hb_000805_270--Hb_002304_100 Hb_000805_270--Hb_002601_040 Hb_000805_270--Hb_000243_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.16732 0.971006 3.41205 0 0.0196942
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0255757 0.0402456 0.0380361 0.969805 0.381392

CAGE analysis