Hb_002601_040

Information

Type -
Description -
Location Contig2601: 17637-18522
Sequence    

Annotation

kegg
ID rcu:RCOM_0897620
description hypothetical protein
nr
ID KDP37141.1
description hypothetical protein JCGZ_06197 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KLM0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06197 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002601_040 0.0 - - hypothetical protein JCGZ_06197 [Jatropha curcas]
2 Hb_000243_340 0.0639405919 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Jatropha curcas]
3 Hb_002304_100 0.0941241191 - - hypothetical protein JCGZ_21524 [Jatropha curcas]
4 Hb_000339_050 0.0964932693 - - PREDICTED: nucleobase-ascorbate transporter 2 [Jatropha curcas]
5 Hb_001645_030 0.0980742237 - - PREDICTED: probable auxin efflux carrier component 1b [Jatropha curcas]
6 Hb_000805_270 0.1052503028 - - PREDICTED: expansin-A4 [Gossypium raimondii]
7 Hb_000086_510 0.1285432863 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
8 Hb_001247_090 0.1314590242 - - PREDICTED: uncharacterized protein LOC105647395 [Jatropha curcas]
9 Hb_005916_040 0.1317703554 - - PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
10 Hb_004357_030 0.132376293 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
11 Hb_001025_100 0.1331010107 - - PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Jatropha curcas]
12 Hb_000834_130 0.1336893226 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000506_050 0.1357898932 - - PREDICTED: thymidine kinase [Jatropha curcas]
14 Hb_000568_020 0.1367166775 - - PREDICTED: probable aquaporin PIP2-5 [Jatropha curcas]
15 Hb_000157_020 0.1374965813 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001616_100 0.1425459549 - - PREDICTED: cell division control protein 45 homolog [Jatropha curcas]
17 Hb_003216_140 0.1435445193 - - F-box protein SNE, putative [Ricinus communis]
18 Hb_002400_480 0.1440534387 - - PREDICTED: uncharacterized protein LOC105637596 [Jatropha curcas]
19 Hb_110631_010 0.1455584848 - - hypothetical protein JCGZ_04359 [Jatropha curcas]
20 Hb_024868_010 0.1469789562 - - protein kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_002601_040 Hb_002601_040 Hb_000243_340 Hb_000243_340 Hb_002601_040--Hb_000243_340 Hb_002304_100 Hb_002304_100 Hb_002601_040--Hb_002304_100 Hb_000339_050 Hb_000339_050 Hb_002601_040--Hb_000339_050 Hb_001645_030 Hb_001645_030 Hb_002601_040--Hb_001645_030 Hb_000805_270 Hb_000805_270 Hb_002601_040--Hb_000805_270 Hb_000086_510 Hb_000086_510 Hb_002601_040--Hb_000086_510 Hb_000243_340--Hb_002304_100 Hb_000243_340--Hb_001645_030 Hb_000568_020 Hb_000568_020 Hb_000243_340--Hb_000568_020 Hb_000834_130 Hb_000834_130 Hb_000243_340--Hb_000834_130 Hb_000243_340--Hb_000339_050 Hb_002304_100--Hb_001645_030 Hb_002304_100--Hb_000568_020 Hb_001247_090 Hb_001247_090 Hb_002304_100--Hb_001247_090 Hb_002304_100--Hb_000339_050 Hb_000339_050--Hb_000805_270 Hb_004357_030 Hb_004357_030 Hb_000339_050--Hb_004357_030 Hb_000506_050 Hb_000506_050 Hb_000339_050--Hb_000506_050 Hb_000157_020 Hb_000157_020 Hb_000339_050--Hb_000157_020 Hb_024868_010 Hb_024868_010 Hb_001645_030--Hb_024868_010 Hb_001645_030--Hb_000834_130 Hb_001645_030--Hb_000568_020 Hb_000805_270--Hb_004357_030 Hb_000805_270--Hb_000506_050 Hb_000805_270--Hb_002304_100 Hb_000805_270--Hb_000243_340 Hb_085829_010 Hb_085829_010 Hb_000086_510--Hb_085829_010 Hb_000334_090 Hb_000334_090 Hb_000086_510--Hb_000334_090 Hb_165110_010 Hb_165110_010 Hb_000086_510--Hb_165110_010 Hb_000320_240 Hb_000320_240 Hb_000086_510--Hb_000320_240 Hb_000086_510--Hb_000157_020 Hb_000086_510--Hb_000243_340
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0428697 0.204204 0.764783 2.47312 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.769179 0.151568

CAGE analysis