Hb_061222_010

Information

Type -
Description -
Location Contig61222: 3-695
Sequence    

Annotation

kegg
ID rcu:RCOM_0012650
description hypothetical protein
nr
ID XP_002531180.1
description hypothetical protein RCOM_0012650 [Ricinus communis]
swissprot
ID Q0WNW4
description Myosin-binding protein 3 OS=Arabidopsis thaliana GN=MYOB3 PE=1 SV=1
trembl
ID B9SYW1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0012650 PE=4 SV=1
Gene Ontology
ID GO:0044267
description intracellular protein transport protein uso1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_061222_010 0.0 - - hypothetical protein RCOM_0012650 [Ricinus communis]
2 Hb_000003_110 0.1149276224 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
3 Hb_000025_160 0.126685845 - - PREDICTED: F-box protein At2g26850 isoform X1 [Jatropha curcas]
4 Hb_031089_020 0.1338017033 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
5 Hb_158092_040 0.1354558398 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
6 Hb_005784_060 0.1359913747 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
7 Hb_000997_240 0.1444063797 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA4, putative [Ricinus communis]
8 Hb_001493_140 0.1484357264 - - hypothetical protein PHAVU_010G123100g [Phaseolus vulgaris]
9 Hb_002233_160 0.1534265995 - - PREDICTED: uncharacterized protein LOC105633094 [Jatropha curcas]
10 Hb_010672_050 0.1564643207 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X3 [Jatropha curcas]
11 Hb_006615_230 0.1581543456 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
12 Hb_006889_030 0.1617199752 - - Aspartic proteinase Asp1 precursor, putative [Ricinus communis]
13 Hb_012395_050 0.1618190865 - - PREDICTED: uncharacterized protein LOC105632180 [Jatropha curcas]
14 Hb_134014_010 0.1623831526 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]
15 Hb_000260_110 0.16255195 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
16 Hb_029977_020 0.1634237167 - - PREDICTED: uncharacterized protein LOC105640153 isoform X1 [Jatropha curcas]
17 Hb_000023_110 0.1647088922 - - PREDICTED: probable methyltransferase PMT21 [Jatropha curcas]
18 Hb_084147_010 0.1655075483 - - amino acid transporter, putative [Ricinus communis]
19 Hb_155444_010 0.1663257555 - - -
20 Hb_003470_110 0.1665344358 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_061222_010 Hb_061222_010 Hb_000003_110 Hb_000003_110 Hb_061222_010--Hb_000003_110 Hb_000025_160 Hb_000025_160 Hb_061222_010--Hb_000025_160 Hb_031089_020 Hb_031089_020 Hb_061222_010--Hb_031089_020 Hb_158092_040 Hb_158092_040 Hb_061222_010--Hb_158092_040 Hb_005784_060 Hb_005784_060 Hb_061222_010--Hb_005784_060 Hb_000997_240 Hb_000997_240 Hb_061222_010--Hb_000997_240 Hb_000003_110--Hb_005784_060 Hb_002900_180 Hb_002900_180 Hb_000003_110--Hb_002900_180 Hb_005253_020 Hb_005253_020 Hb_000003_110--Hb_005253_020 Hb_002292_080 Hb_002292_080 Hb_000003_110--Hb_002292_080 Hb_001616_100 Hb_001616_100 Hb_000003_110--Hb_001616_100 Hb_002233_160 Hb_002233_160 Hb_000025_160--Hb_002233_160 Hb_012395_110 Hb_012395_110 Hb_000025_160--Hb_012395_110 Hb_000193_340 Hb_000193_340 Hb_000025_160--Hb_000193_340 Hb_004241_110 Hb_004241_110 Hb_000025_160--Hb_004241_110 Hb_000023_110 Hb_000023_110 Hb_000025_160--Hb_000023_110 Hb_003470_110 Hb_003470_110 Hb_031089_020--Hb_003470_110 Hb_084147_010 Hb_084147_010 Hb_031089_020--Hb_084147_010 Hb_001922_030 Hb_001922_030 Hb_031089_020--Hb_001922_030 Hb_031089_020--Hb_004241_110 Hb_002200_070 Hb_002200_070 Hb_031089_020--Hb_002200_070 Hb_030565_100 Hb_030565_100 Hb_031089_020--Hb_030565_100 Hb_080477_080 Hb_080477_080 Hb_158092_040--Hb_080477_080 Hb_006615_230 Hb_006615_230 Hb_158092_040--Hb_006615_230 Hb_001119_070 Hb_001119_070 Hb_158092_040--Hb_001119_070 Hb_005333_080 Hb_005333_080 Hb_158092_040--Hb_005333_080 Hb_004522_030 Hb_004522_030 Hb_158092_040--Hb_004522_030 Hb_134014_010 Hb_134014_010 Hb_158092_040--Hb_134014_010 Hb_007138_030 Hb_007138_030 Hb_005784_060--Hb_007138_030 Hb_000975_200 Hb_000975_200 Hb_005784_060--Hb_000975_200 Hb_005784_060--Hb_000997_240 Hb_179960_010 Hb_179960_010 Hb_005784_060--Hb_179960_010 Hb_005000_280 Hb_005000_280 Hb_005784_060--Hb_005000_280 Hb_002999_080 Hb_002999_080 Hb_000997_240--Hb_002999_080 Hb_001348_010 Hb_001348_010 Hb_000997_240--Hb_001348_010 Hb_000997_240--Hb_005000_280 Hb_029142_040 Hb_029142_040 Hb_000997_240--Hb_029142_040 Hb_155444_010 Hb_155444_010 Hb_000997_240--Hb_155444_010 Hb_012395_050 Hb_012395_050 Hb_000997_240--Hb_012395_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.318516 0.866049 2.21066 0.069038 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0820469 0.128998 0.114956 0.551349 0.637026

CAGE analysis