Hb_001922_030

Information

Type -
Description -
Location Contig1922: 21153-22729
Sequence    

Annotation

kegg
ID rcu:RCOM_1581540
description hypothetical protein
nr
ID XP_012090160.1
description PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
swissprot
ID Q9FLX4
description Probable membrane-associated kinase regulator 5 OS=Arabidopsis thaliana GN=MAKR5 PE=2 SV=1
trembl
ID A0A067JEH1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26033 PE=4 SV=1
Gene Ontology
ID GO:0006950
description probable membrane-associated kinase regulator 5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001922_030 0.0 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
2 Hb_031089_020 0.1199985867 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
3 Hb_000920_160 0.1228139003 - - annexin [Manihot esculenta]
4 Hb_001329_180 0.127010279 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
5 Hb_000120_940 0.1558358982 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
6 Hb_026527_010 0.1581691743 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
7 Hb_000463_120 0.1607187553 - - LRR receptor-like serine/threonine-protein kinase, putative [Theobroma cacao]
8 Hb_003001_050 0.1619687081 - - hypothetical protein RCOM_1749890 [Ricinus communis]
9 Hb_000806_130 0.1638152439 - - Adenosine kinase 2 [Theobroma cacao]
10 Hb_003470_110 0.1644818248 - - unnamed protein product [Vitis vinifera]
11 Hb_002097_140 0.1684034381 - - CHY zinc finger family protein, expressed [Oryza sativa Japonica Group]
12 Hb_006788_040 0.1696495837 - - calmodulin, putative [Ricinus communis]
13 Hb_005784_060 0.1722693444 - - PREDICTED: U-box domain-containing protein 28 [Jatropha curcas]
14 Hb_002686_260 0.1725540333 transcription factor TF Family: NAC NAC domain-containing protein 21/22, putative [Ricinus communis]
15 Hb_029223_040 0.1730705032 - - s-adenosylmethionine synthetase, putative [Ricinus communis]
16 Hb_158092_040 0.1744306402 - - PREDICTED: uncharacterized protein LOC105647294 [Jatropha curcas]
17 Hb_179960_010 0.1750424554 - - PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Jatropha curcas]
18 Hb_001148_100 0.1763761232 - - -
19 Hb_030565_100 0.1789240007 - - serine hydroxymethyltransferase, putative [Ricinus communis]
20 Hb_000696_070 0.1792071825 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001922_030 Hb_001922_030 Hb_031089_020 Hb_031089_020 Hb_001922_030--Hb_031089_020 Hb_000920_160 Hb_000920_160 Hb_001922_030--Hb_000920_160 Hb_001329_180 Hb_001329_180 Hb_001922_030--Hb_001329_180 Hb_000120_940 Hb_000120_940 Hb_001922_030--Hb_000120_940 Hb_026527_010 Hb_026527_010 Hb_001922_030--Hb_026527_010 Hb_000463_120 Hb_000463_120 Hb_001922_030--Hb_000463_120 Hb_003470_110 Hb_003470_110 Hb_031089_020--Hb_003470_110 Hb_084147_010 Hb_084147_010 Hb_031089_020--Hb_084147_010 Hb_004241_110 Hb_004241_110 Hb_031089_020--Hb_004241_110 Hb_002200_070 Hb_002200_070 Hb_031089_020--Hb_002200_070 Hb_030565_100 Hb_030565_100 Hb_031089_020--Hb_030565_100 Hb_000920_160--Hb_000120_940 Hb_000920_160--Hb_031089_020 Hb_002759_070 Hb_002759_070 Hb_000920_160--Hb_002759_070 Hb_000920_160--Hb_001329_180 Hb_000920_160--Hb_026527_010 Hb_000806_130 Hb_000806_130 Hb_001329_180--Hb_000806_130 Hb_001329_180--Hb_026527_010 Hb_000236_190 Hb_000236_190 Hb_001329_180--Hb_000236_190 Hb_001329_180--Hb_030565_100 Hb_000300_420 Hb_000300_420 Hb_001329_180--Hb_000300_420 Hb_000120_940--Hb_002759_070 Hb_005253_020 Hb_005253_020 Hb_000120_940--Hb_005253_020 Hb_000120_940--Hb_000463_120 Hb_000003_210 Hb_000003_210 Hb_000120_940--Hb_000003_210 Hb_000297_140 Hb_000297_140 Hb_000120_940--Hb_000297_140 Hb_000696_070 Hb_000696_070 Hb_026527_010--Hb_000696_070 Hb_026527_010--Hb_003470_110 Hb_020805_140 Hb_020805_140 Hb_026527_010--Hb_020805_140 Hb_002701_090 Hb_002701_090 Hb_026527_010--Hb_002701_090 Hb_002781_050 Hb_002781_050 Hb_026527_010--Hb_002781_050 Hb_000463_120--Hb_030565_100 Hb_001404_070 Hb_001404_070 Hb_000463_120--Hb_001404_070 Hb_002203_020 Hb_002203_020 Hb_000463_120--Hb_002203_020 Hb_029223_040 Hb_029223_040 Hb_000463_120--Hb_029223_040 Hb_000077_100 Hb_000077_100 Hb_000463_120--Hb_000077_100 Hb_009122_010 Hb_009122_010 Hb_000463_120--Hb_009122_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.167281 0.719644 2.28696 10.4245 0.0272763 0.108061
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.32762 0.548333 0.19582 2.94135 2.50706

CAGE analysis