Hb_000920_160

Information

Type -
Description -
Location Contig920: 91240-93321
Sequence    

Annotation

kegg
ID rcu:RCOM_1453010
description annexin, putative
nr
ID AJJ90394.1
description annexin [Manihot esculenta]
swissprot
ID P51074
description Annexin-like protein RJ4 OS=Fragaria ananassa PE=2 SV=2
trembl
ID A0A0C4ZPU9
description Ann4 protein OS=Manihot esculenta GN=Ann4 PE=2 SV=1
Gene Ontology
ID GO:0005509
description annexin-like protein rj4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62397: 91253-93268
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000920_160 0.0 - - annexin [Manihot esculenta]
2 Hb_000120_940 0.0869817859 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
3 Hb_001922_030 0.1228139003 - - PREDICTED: probable membrane-associated kinase regulator 5 [Jatropha curcas]
4 Hb_031089_020 0.1380835923 - - Nodulation receptor kinase precursor, putative [Ricinus communis]
5 Hb_002759_070 0.1435952672 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
6 Hb_001329_180 0.1540834879 - - S-adenosylmethionine synthetase 1 family protein [Populus trichocarpa]
7 Hb_026527_010 0.1568114991 - - PREDICTED: caffeoylshikimate esterase-like [Populus euphratica]
8 Hb_001369_630 0.1625813662 - - PREDICTED: UDP-glucuronate 4-epimerase 3-like [Jatropha curcas]
9 Hb_000529_010 0.1629919767 - - cyclin d, putative [Ricinus communis]
10 Hb_000806_130 0.1674504594 - - Adenosine kinase 2 [Theobroma cacao]
11 Hb_061222_010 0.1696517203 - - hypothetical protein RCOM_0012650 [Ricinus communis]
12 Hb_000696_070 0.171989289 - - PREDICTED: aspartic proteinase-like protein 1 [Jatropha curcas]
13 Hb_002701_090 0.1733175998 - - hypothetical protein POPTR_0017s13430g [Populus trichocarpa]
14 Hb_004055_020 0.1744092101 - - PREDICTED: uncharacterized protein LOC105631433 [Jatropha curcas]
15 Hb_002200_070 0.1750649733 - - PREDICTED: endoglucanase 9-like [Populus euphratica]
16 Hb_002781_050 0.176950378 - - cytochrome B5 isoform 1, putative [Ricinus communis]
17 Hb_003470_110 0.177310776 - - unnamed protein product [Vitis vinifera]
18 Hb_000808_150 0.178870631 - - PREDICTED: uncharacterized protein LOC105647444 [Jatropha curcas]
19 Hb_084147_010 0.1792513759 - - amino acid transporter, putative [Ricinus communis]
20 Hb_000649_040 0.1805200288 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]

Gene co-expression network

sample Hb_000920_160 Hb_000920_160 Hb_000120_940 Hb_000120_940 Hb_000920_160--Hb_000120_940 Hb_001922_030 Hb_001922_030 Hb_000920_160--Hb_001922_030 Hb_031089_020 Hb_031089_020 Hb_000920_160--Hb_031089_020 Hb_002759_070 Hb_002759_070 Hb_000920_160--Hb_002759_070 Hb_001329_180 Hb_001329_180 Hb_000920_160--Hb_001329_180 Hb_026527_010 Hb_026527_010 Hb_000920_160--Hb_026527_010 Hb_000120_940--Hb_002759_070 Hb_005253_020 Hb_005253_020 Hb_000120_940--Hb_005253_020 Hb_000463_120 Hb_000463_120 Hb_000120_940--Hb_000463_120 Hb_000003_210 Hb_000003_210 Hb_000120_940--Hb_000003_210 Hb_000297_140 Hb_000297_140 Hb_000120_940--Hb_000297_140 Hb_001922_030--Hb_031089_020 Hb_001922_030--Hb_001329_180 Hb_001922_030--Hb_000120_940 Hb_001922_030--Hb_026527_010 Hb_001922_030--Hb_000463_120 Hb_003470_110 Hb_003470_110 Hb_031089_020--Hb_003470_110 Hb_084147_010 Hb_084147_010 Hb_031089_020--Hb_084147_010 Hb_004241_110 Hb_004241_110 Hb_031089_020--Hb_004241_110 Hb_002200_070 Hb_002200_070 Hb_031089_020--Hb_002200_070 Hb_030565_100 Hb_030565_100 Hb_031089_020--Hb_030565_100 Hb_002486_020 Hb_002486_020 Hb_002759_070--Hb_002486_020 Hb_161396_010 Hb_161396_010 Hb_002759_070--Hb_161396_010 Hb_000438_120 Hb_000438_120 Hb_002759_070--Hb_000438_120 Hb_001621_100 Hb_001621_100 Hb_002759_070--Hb_001621_100 Hb_000806_130 Hb_000806_130 Hb_001329_180--Hb_000806_130 Hb_001329_180--Hb_026527_010 Hb_000236_190 Hb_000236_190 Hb_001329_180--Hb_000236_190 Hb_001329_180--Hb_030565_100 Hb_000300_420 Hb_000300_420 Hb_001329_180--Hb_000300_420 Hb_000696_070 Hb_000696_070 Hb_026527_010--Hb_000696_070 Hb_026527_010--Hb_003470_110 Hb_020805_140 Hb_020805_140 Hb_026527_010--Hb_020805_140 Hb_002701_090 Hb_002701_090 Hb_026527_010--Hb_002701_090 Hb_002781_050 Hb_002781_050 Hb_026527_010--Hb_002781_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.9876 2.07461 18.9653 50.0865 0.685137 0.132834
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
7.58861 3.13703 2.49781 12.7406 19.013

CAGE analysis