Hb_002759_070

Information

Type -
Description -
Location Contig2759: 58594-62636
Sequence    

Annotation

kegg
ID rcu:RCOM_0394200
description purine permease, putative
nr
ID XP_012092049.1
description PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
swissprot
ID Q27GI3
description Nucleobase-ascorbate transporter 6 OS=Arabidopsis thaliana GN=NAT6 PE=2 SV=2
trembl
ID A0A067JP55
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21780 PE=4 SV=1
Gene Ontology
ID GO:0016020
description nucleobase-ascorbate transporter 6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002759_070 0.0 - - PREDICTED: nucleobase-ascorbate transporter 7 [Jatropha curcas]
2 Hb_002486_020 0.1276002572 - - ATP binding protein, putative [Ricinus communis]
3 Hb_000120_940 0.1325959257 - - PREDICTED: phosphoserine aminotransferase 1, chloroplastic-like [Jatropha curcas]
4 Hb_000920_160 0.1435952672 - - annexin [Manihot esculenta]
5 Hb_161396_010 0.1488780775 - - hypothetical protein F383_26394 [Gossypium arboreum]
6 Hb_000438_120 0.1526572094 - - CBL-interacting serine/threonine-protein kinase, putative [Ricinus communis]
7 Hb_001621_100 0.1555069153 - - PREDICTED: L-type lectin-domain containing receptor kinase S.4 [Jatropha curcas]
8 Hb_004032_110 0.1556131877 - - PREDICTED: putative methylesterase 14, chloroplastic [Jatropha curcas]
9 Hb_002284_220 0.163640995 - - PREDICTED: F-box/kelch-repeat protein At5g42360-like [Jatropha curcas]
10 Hb_002200_070 0.1674797038 - - PREDICTED: endoglucanase 9-like [Populus euphratica]
11 Hb_000529_010 0.167879407 - - cyclin d, putative [Ricinus communis]
12 Hb_002949_020 0.1680384212 transcription factor TF Family: bHLH hypothetical protein POPTR_0002s23650g [Populus trichocarpa]
13 Hb_000077_310 0.1728467611 - - PREDICTED: clathrin light chain 1 [Jatropha curcas]
14 Hb_000054_030 0.1754409324 - - hypothetical protein POPTR_0010s17680g [Populus trichocarpa]
15 Hb_006978_020 0.1757945771 - - PREDICTED: psbP domain-containing protein 5, chloroplastic isoform X2 [Jatropha curcas]
16 Hb_000768_150 0.1774578135 - - PREDICTED: glycine-rich protein A3-like [Fragaria vesca subsp. vesca]
17 Hb_005976_010 0.1778690503 - - PREDICTED: PI-PLC X domain-containing protein At5g67130-like isoform X1 [Jatropha curcas]
18 Hb_048476_140 0.1779267544 - - PREDICTED: dynamin-related protein 1C [Jatropha curcas]
19 Hb_000115_250 0.1786857644 - - PREDICTED: endonuclease 2 [Jatropha curcas]
20 Hb_003226_200 0.1797085619 - - magnesium/proton exchanger, putative [Ricinus communis]

Gene co-expression network

sample Hb_002759_070 Hb_002759_070 Hb_002486_020 Hb_002486_020 Hb_002759_070--Hb_002486_020 Hb_000120_940 Hb_000120_940 Hb_002759_070--Hb_000120_940 Hb_000920_160 Hb_000920_160 Hb_002759_070--Hb_000920_160 Hb_161396_010 Hb_161396_010 Hb_002759_070--Hb_161396_010 Hb_000438_120 Hb_000438_120 Hb_002759_070--Hb_000438_120 Hb_001621_100 Hb_001621_100 Hb_002759_070--Hb_001621_100 Hb_002284_220 Hb_002284_220 Hb_002486_020--Hb_002284_220 Hb_000110_060 Hb_000110_060 Hb_002486_020--Hb_000110_060 Hb_003226_200 Hb_003226_200 Hb_002486_020--Hb_003226_200 Hb_000768_150 Hb_000768_150 Hb_002486_020--Hb_000768_150 Hb_005470_030 Hb_005470_030 Hb_002486_020--Hb_005470_030 Hb_000120_940--Hb_000920_160 Hb_005253_020 Hb_005253_020 Hb_000120_940--Hb_005253_020 Hb_000463_120 Hb_000463_120 Hb_000120_940--Hb_000463_120 Hb_000003_210 Hb_000003_210 Hb_000120_940--Hb_000003_210 Hb_000297_140 Hb_000297_140 Hb_000120_940--Hb_000297_140 Hb_001922_030 Hb_001922_030 Hb_000920_160--Hb_001922_030 Hb_031089_020 Hb_031089_020 Hb_000920_160--Hb_031089_020 Hb_001329_180 Hb_001329_180 Hb_000920_160--Hb_001329_180 Hb_026527_010 Hb_026527_010 Hb_000920_160--Hb_026527_010 Hb_000076_030 Hb_000076_030 Hb_161396_010--Hb_000076_030 Hb_007101_260 Hb_007101_260 Hb_161396_010--Hb_007101_260 Hb_000193_340 Hb_000193_340 Hb_161396_010--Hb_000193_340 Hb_000808_150 Hb_000808_150 Hb_161396_010--Hb_000808_150 Hb_048476_140 Hb_048476_140 Hb_161396_010--Hb_048476_140 Hb_002759_220 Hb_002759_220 Hb_161396_010--Hb_002759_220 Hb_000107_350 Hb_000107_350 Hb_000438_120--Hb_000107_350 Hb_000649_040 Hb_000649_040 Hb_000438_120--Hb_000649_040 Hb_000438_120--Hb_000808_150 Hb_005976_010 Hb_005976_010 Hb_000438_120--Hb_005976_010 Hb_000438_120--Hb_161396_010 Hb_002200_070 Hb_002200_070 Hb_001621_100--Hb_002200_070 Hb_001621_100--Hb_000768_150 Hb_001546_010 Hb_001546_010 Hb_001621_100--Hb_001546_010 Hb_003470_110 Hb_003470_110 Hb_001621_100--Hb_003470_110 Hb_000580_110 Hb_000580_110 Hb_001621_100--Hb_000580_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0219942 0.149109 1.41523 2.65105 0.0110143 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.400157 0.51162 0.223304 1.15972 1.94895

CAGE analysis