Hb_004947_010

Information

Type -
Description -
Location Contig4947: 22-2065
Sequence    

Annotation

kegg
ID egr:104450689
description receptor-like protein 12
nr
ID XP_012075935.1
description PREDICTED: receptor-like protein 12 [Jatropha curcas]
swissprot
ID Q6XAT2
description LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1
trembl
ID A0A059DD34
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01034 PE=4 SV=1
Gene Ontology
ID GO:0005515
description receptor-like protein 12

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004947_010 0.0 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
2 Hb_016875_010 0.1020896583 - - receptor protein kinase, putative [Ricinus communis]
3 Hb_008054_060 0.1161128953 - - PREDICTED: beta-amyrin synthase-like [Populus euphratica]
4 Hb_033153_080 0.1545310642 - - PREDICTED: anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Populus euphratica]
5 Hb_094529_020 0.1797194064 - - leucine-rich repeat containing protein, putative [Ricinus communis]
6 Hb_112440_010 0.1877460841 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
7 Hb_000160_050 0.1948125118 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
8 Hb_003095_080 0.2232198847 - - -
9 Hb_017400_010 0.2298019668 - - unnamed protein product [Vitis vinifera]
10 Hb_019818_010 0.2323828933 - - PREDICTED: potassium transporter 5-like [Jatropha curcas]
11 Hb_001633_190 0.2386648036 - - PREDICTED: probable methyltransferase PMT11 [Jatropha curcas]
12 Hb_012092_070 0.2399821779 - - PREDICTED: uncharacterized protein LOC105644084 [Jatropha curcas]
13 Hb_002367_030 0.2413614669 - - hypothetical protein POPTR_0001s30725g [Populus trichocarpa]
14 Hb_001894_080 0.2643732564 - - ATP binding protein, putative [Ricinus communis]
15 Hb_132840_120 0.2710818188 - - Vacuolar protein sorting-associated protein 8 like [Glycine soja]
16 Hb_001754_160 0.2842473364 - - PREDICTED: flowering-promoting factor 1-like protein 3 [Jatropha curcas]
17 Hb_003540_180 0.285840877 - - -
18 Hb_001248_120 0.2860220609 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000718_050 0.2871433502 - - PREDICTED: histone deacetylase 15 isoform X2 [Populus euphratica]
20 Hb_001102_310 0.2896323169 - - Protein AFR, putative [Ricinus communis]

Gene co-expression network

sample Hb_004947_010 Hb_004947_010 Hb_016875_010 Hb_016875_010 Hb_004947_010--Hb_016875_010 Hb_008054_060 Hb_008054_060 Hb_004947_010--Hb_008054_060 Hb_033153_080 Hb_033153_080 Hb_004947_010--Hb_033153_080 Hb_094529_020 Hb_094529_020 Hb_004947_010--Hb_094529_020 Hb_112440_010 Hb_112440_010 Hb_004947_010--Hb_112440_010 Hb_000160_050 Hb_000160_050 Hb_004947_010--Hb_000160_050 Hb_016875_010--Hb_000160_050 Hb_003095_080 Hb_003095_080 Hb_016875_010--Hb_003095_080 Hb_016875_010--Hb_008054_060 Hb_016875_010--Hb_033153_080 Hb_016875_010--Hb_094529_020 Hb_008054_060--Hb_112440_010 Hb_000718_050 Hb_000718_050 Hb_008054_060--Hb_000718_050 Hb_008054_060--Hb_003095_080 Hb_185111_010 Hb_185111_010 Hb_008054_060--Hb_185111_010 Hb_033153_080--Hb_000160_050 Hb_033153_080--Hb_094529_020 Hb_003540_180 Hb_003540_180 Hb_033153_080--Hb_003540_180 Hb_002367_030 Hb_002367_030 Hb_033153_080--Hb_002367_030 Hb_001248_120 Hb_001248_120 Hb_094529_020--Hb_001248_120 Hb_094529_020--Hb_000160_050 Hb_003411_120 Hb_003411_120 Hb_094529_020--Hb_003411_120 Hb_112440_010--Hb_000718_050 Hb_112440_010--Hb_185111_010 Hb_000892_020 Hb_000892_020 Hb_112440_010--Hb_000892_020 Hb_112440_010--Hb_003095_080 Hb_051677_010 Hb_051677_010 Hb_000160_050--Hb_051677_010 Hb_002391_060 Hb_002391_060 Hb_000160_050--Hb_002391_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0441838 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0175723 0 0.00699042 0

CAGE analysis