Hb_112440_010

Information

Type -
Description -
Location Contig112440: 3-721
Sequence    

Annotation

kegg
ID sot:102604542
description uncharacterized LOC102604542
nr
ID XP_012066659.1
description PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L1T8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00233 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112440_010 0.0 - - PREDICTED: uncharacterized protein LOC105629655 [Jatropha curcas]
2 Hb_008054_060 0.0722826506 - - PREDICTED: beta-amyrin synthase-like [Populus euphratica]
3 Hb_000718_050 0.1013948742 - - PREDICTED: histone deacetylase 15 isoform X2 [Populus euphratica]
4 Hb_185111_010 0.1714209874 - - -
5 Hb_004947_010 0.1877460841 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
6 Hb_000892_020 0.1883116575 - - unnamed protein product [Vitis vinifera]
7 Hb_003095_080 0.1890288842 - - -
8 Hb_016875_010 0.2189783022 - - receptor protein kinase, putative [Ricinus communis]
9 Hb_000318_090 0.2435560799 - - PREDICTED: uncharacterized protein LOC105179663 [Sesamum indicum]
10 Hb_004267_030 0.2691976329 - - cytochrome P450, putative [Ricinus communis]
11 Hb_003266_070 0.2729202071 - - -
12 Hb_000087_090 0.2819587393 transcription factor TF Family: M-type PREDICTED: agamous-like MADS-box protein AGL61 [Jatropha curcas]
13 Hb_007181_030 0.2823654377 - - PREDICTED: uncharacterized protein LOC105649502 isoform X2 [Jatropha curcas]
14 Hb_001946_020 0.2853268862 - - hypothetical protein RCOM_0224470 [Ricinus communis]
15 Hb_004728_030 0.3024405984 - - hypothetical protein, partial [Lactobacillus brevis]
16 Hb_132840_120 0.302850632 - - Vacuolar protein sorting-associated protein 8 like [Glycine soja]
17 Hb_001729_040 0.3034195994 - - hypothetical protein glysoja_049826, partial [Glycine soja]
18 Hb_015220_010 0.3154114854 - - PREDICTED: ribonuclease 3-like protein 3 [Jatropha curcas]
19 Hb_012092_070 0.3188078803 - - PREDICTED: uncharacterized protein LOC105644084 [Jatropha curcas]
20 Hb_000866_250 0.3240136878 - - acyl-CoA thioesterase, putative [Ricinus communis]

Gene co-expression network

sample Hb_112440_010 Hb_112440_010 Hb_008054_060 Hb_008054_060 Hb_112440_010--Hb_008054_060 Hb_000718_050 Hb_000718_050 Hb_112440_010--Hb_000718_050 Hb_185111_010 Hb_185111_010 Hb_112440_010--Hb_185111_010 Hb_004947_010 Hb_004947_010 Hb_112440_010--Hb_004947_010 Hb_000892_020 Hb_000892_020 Hb_112440_010--Hb_000892_020 Hb_003095_080 Hb_003095_080 Hb_112440_010--Hb_003095_080 Hb_008054_060--Hb_004947_010 Hb_016875_010 Hb_016875_010 Hb_008054_060--Hb_016875_010 Hb_008054_060--Hb_000718_050 Hb_008054_060--Hb_003095_080 Hb_008054_060--Hb_185111_010 Hb_000718_050--Hb_000892_020 Hb_000718_050--Hb_185111_010 Hb_000318_090 Hb_000318_090 Hb_000718_050--Hb_000318_090 Hb_001729_040 Hb_001729_040 Hb_000718_050--Hb_001729_040 Hb_185111_010--Hb_000318_090 Hb_185111_010--Hb_000892_020 Hb_185111_010--Hb_001729_040 Hb_007181_030 Hb_007181_030 Hb_185111_010--Hb_007181_030 Hb_004947_010--Hb_016875_010 Hb_033153_080 Hb_033153_080 Hb_004947_010--Hb_033153_080 Hb_094529_020 Hb_094529_020 Hb_004947_010--Hb_094529_020 Hb_000160_050 Hb_000160_050 Hb_004947_010--Hb_000160_050 Hb_000892_020--Hb_000318_090 Hb_000892_020--Hb_001729_040 Hb_015220_010 Hb_015220_010 Hb_000892_020--Hb_015220_010 Hb_004267_030 Hb_004267_030 Hb_003095_080--Hb_004267_030 Hb_001946_020 Hb_001946_020 Hb_003095_080--Hb_001946_020 Hb_003095_080--Hb_016875_010 Hb_003095_080--Hb_007181_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.242462 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.233027 0 0.0974656 0

CAGE analysis