Hb_000160_050

Information

Type -
Description -
Location Contig160: 51693-52095
Sequence    

Annotation

kegg
ID cic:CICLE_v10013623mg
description hypothetical protein
nr
ID KDP22674.1
description hypothetical protein JCGZ_02516 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JT24
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02516 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000160_050 0.0 - - hypothetical protein JCGZ_02516 [Jatropha curcas]
2 Hb_033153_080 0.0997432488 - - PREDICTED: anthocyanidin 3-O-glucoside 2''-O-glucosyltransferase-like [Populus euphratica]
3 Hb_016875_010 0.148581092 - - receptor protein kinase, putative [Ricinus communis]
4 Hb_004947_010 0.1948125118 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
5 Hb_094529_020 0.2048722377 - - leucine-rich repeat containing protein, putative [Ricinus communis]
6 Hb_051677_010 0.2110588539 - - Uncharacterized protein TCM_017953 [Theobroma cacao]
7 Hb_002391_060 0.2110651844 - - PREDICTED: uncharacterized protein LOC100853799 [Vitis vinifera]
8 Hb_007455_010 0.2110666717 - - PREDICTED: uncharacterized protein LOC105800996 [Gossypium raimondii]
9 Hb_025161_040 0.2114740345 - - kinase, putative [Ricinus communis]
10 Hb_002792_040 0.2117294548 - - -
11 Hb_000029_240 0.2119800947 - - PREDICTED: pre-mRNA-splicing factor SLU7-A-like [Elaeis guineensis]
12 Hb_002281_030 0.2121156673 - - -
13 Hb_065272_010 0.2125095772 - - hypothetical protein JCGZ_06349 [Jatropha curcas]
14 Hb_002092_050 0.2130360672 - - hypothetical protein JCGZ_05877 [Jatropha curcas]
15 Hb_000331_600 0.2134116838 - - PREDICTED: probable Ufm1-specific protease [Jatropha curcas]
16 Hb_012090_010 0.2138385112 - - hypothetical protein RCOM_0904330 [Ricinus communis]
17 Hb_000313_240 0.2139224721 - - hypothetical protein RCOM_0377590 [Ricinus communis]
18 Hb_000552_040 0.2139458611 - - -
19 Hb_001950_050 0.215112716 - - -
20 Hb_001304_150 0.2161458139 - - hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis]

Gene co-expression network

sample Hb_000160_050 Hb_000160_050 Hb_033153_080 Hb_033153_080 Hb_000160_050--Hb_033153_080 Hb_016875_010 Hb_016875_010 Hb_000160_050--Hb_016875_010 Hb_004947_010 Hb_004947_010 Hb_000160_050--Hb_004947_010 Hb_094529_020 Hb_094529_020 Hb_000160_050--Hb_094529_020 Hb_051677_010 Hb_051677_010 Hb_000160_050--Hb_051677_010 Hb_002391_060 Hb_002391_060 Hb_000160_050--Hb_002391_060 Hb_033153_080--Hb_094529_020 Hb_033153_080--Hb_004947_010 Hb_033153_080--Hb_016875_010 Hb_003540_180 Hb_003540_180 Hb_033153_080--Hb_003540_180 Hb_002367_030 Hb_002367_030 Hb_033153_080--Hb_002367_030 Hb_016875_010--Hb_004947_010 Hb_003095_080 Hb_003095_080 Hb_016875_010--Hb_003095_080 Hb_008054_060 Hb_008054_060 Hb_016875_010--Hb_008054_060 Hb_016875_010--Hb_094529_020 Hb_004947_010--Hb_008054_060 Hb_004947_010--Hb_094529_020 Hb_112440_010 Hb_112440_010 Hb_004947_010--Hb_112440_010 Hb_001248_120 Hb_001248_120 Hb_094529_020--Hb_001248_120 Hb_003411_120 Hb_003411_120 Hb_094529_020--Hb_003411_120 Hb_051677_010--Hb_002391_060 Hb_007455_010 Hb_007455_010 Hb_051677_010--Hb_007455_010 Hb_025161_040 Hb_025161_040 Hb_051677_010--Hb_025161_040 Hb_002792_040 Hb_002792_040 Hb_051677_010--Hb_002792_040 Hb_000029_240 Hb_000029_240 Hb_051677_010--Hb_000029_240 Hb_002281_030 Hb_002281_030 Hb_051677_010--Hb_002281_030 Hb_002391_060--Hb_007455_010 Hb_002391_060--Hb_025161_040 Hb_002391_060--Hb_000029_240 Hb_002391_060--Hb_002792_040 Hb_065272_010 Hb_065272_010 Hb_002391_060--Hb_065272_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.20698 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.23919 0 0.326046 0

CAGE analysis