Hb_033870_010

Information

Type -
Description -
Location Contig33870: 284-562
Sequence    

Annotation

kegg
ID rcu:RCOM_0811650
description hypothetical protein
nr
ID XP_009606819.1
description PREDICTED: uncharacterized protein LOC104101109 isoform X1 [Nicotiana tomentosiformis]
swissprot
ID Q1GTB8
description Kynurenine formamidase OS=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) GN=kynB PE=3 SV=1
trembl
ID M1C4B8
description Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG402023116 PE=4 SV=1
Gene Ontology
ID GO:0004061
description PREDICTED: uncharacterized protein LOC104101109 isoform X1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_033870_010 0.0 - - PREDICTED: uncharacterized protein LOC104101109 isoform X1 [Nicotiana tomentosiformis]
2 Hb_000329_260 0.2076721161 - - hypothetical protein MIMGU_mgv1a016162mg [Erythranthe guttata]
3 Hb_000895_080 0.2310903166 - - PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Jatropha curcas]
4 Hb_000032_050 0.275275622 - - hypothetical protein RCOM_1691130 [Ricinus communis]
5 Hb_001864_090 0.2893925969 - - -
6 Hb_001417_080 0.3124315826 - - Calmodulin, putative [Ricinus communis]
7 Hb_033546_020 0.3206686956 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
8 Hb_007889_020 0.3217740064 - - conserved hypothetical protein [Ricinus communis]
9 Hb_003206_100 0.3320881261 - - -
10 Hb_056559_010 0.3333147414 - - PREDICTED: uncharacterized protein LOC104088595 [Nicotiana tomentosiformis]
11 Hb_001922_180 0.3352420273 - - hevamine-A precursor, putative [Ricinus communis]
12 Hb_009051_020 0.3410843567 - - Thioredoxin O1 [Morus notabilis]
13 Hb_034482_010 0.342748571 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000946_160 0.3461928961 transcription factor TF Family: GNAT PREDICTED: uncharacterized N-acetyltransferase ycf52 [Jatropha curcas]
15 Hb_027450_020 0.3564429343 - - PREDICTED: B3 domain-containing protein At2g31420-like [Citrus sinensis]
16 Hb_009486_110 0.3565723679 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
17 Hb_007273_020 0.3580655724 - - PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4 [Cicer arietinum]
18 Hb_002228_100 0.3598632609 - - calcineurin-like phosphoesterase [Manihot esculenta]
19 Hb_118228_010 0.3677108183 - - PREDICTED: pirin-like protein [Jatropha curcas]
20 Hb_000179_120 0.3698462856 - - PREDICTED: corepressor interacting with RBPJ 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_033870_010 Hb_033870_010 Hb_000329_260 Hb_000329_260 Hb_033870_010--Hb_000329_260 Hb_000895_080 Hb_000895_080 Hb_033870_010--Hb_000895_080 Hb_000032_050 Hb_000032_050 Hb_033870_010--Hb_000032_050 Hb_001864_090 Hb_001864_090 Hb_033870_010--Hb_001864_090 Hb_001417_080 Hb_001417_080 Hb_033870_010--Hb_001417_080 Hb_033546_020 Hb_033546_020 Hb_033870_010--Hb_033546_020 Hb_001979_030 Hb_001979_030 Hb_000329_260--Hb_001979_030 Hb_000329_260--Hb_001417_080 Hb_000329_260--Hb_001864_090 Hb_000136_160 Hb_000136_160 Hb_000329_260--Hb_000136_160 Hb_000329_260--Hb_000032_050 Hb_000895_080--Hb_000032_050 Hb_000895_080--Hb_033546_020 Hb_007273_020 Hb_007273_020 Hb_000895_080--Hb_007273_020 Hb_001377_280 Hb_001377_280 Hb_000895_080--Hb_001377_280 Hb_113739_010 Hb_113739_010 Hb_000895_080--Hb_113739_010 Hb_001922_180 Hb_001922_180 Hb_000032_050--Hb_001922_180 Hb_000445_170 Hb_000445_170 Hb_000032_050--Hb_000445_170 Hb_000032_050--Hb_113739_010 Hb_000109_230 Hb_000109_230 Hb_000032_050--Hb_000109_230 Hb_033354_020 Hb_033354_020 Hb_000032_050--Hb_033354_020 Hb_001828_100 Hb_001828_100 Hb_000032_050--Hb_001828_100 Hb_000946_160 Hb_000946_160 Hb_001864_090--Hb_000946_160 Hb_001864_090--Hb_001922_180 Hb_005489_010 Hb_005489_010 Hb_001864_090--Hb_005489_010 Hb_003206_100 Hb_003206_100 Hb_001864_090--Hb_003206_100 Hb_002025_210 Hb_002025_210 Hb_001864_090--Hb_002025_210 Hb_021888_040 Hb_021888_040 Hb_001864_090--Hb_021888_040 Hb_024399_030 Hb_024399_030 Hb_001417_080--Hb_024399_030 Hb_010812_090 Hb_010812_090 Hb_001417_080--Hb_010812_090 Hb_002259_050 Hb_002259_050 Hb_001417_080--Hb_002259_050 Hb_002299_020 Hb_002299_020 Hb_001417_080--Hb_002299_020 Hb_001377_300 Hb_001377_300 Hb_033546_020--Hb_001377_300 Hb_001998_170 Hb_001998_170 Hb_033546_020--Hb_001998_170 Hb_113084_010 Hb_113084_010 Hb_033546_020--Hb_113084_010 Hb_003906_020 Hb_003906_020 Hb_033546_020--Hb_003906_020 Hb_007889_020 Hb_007889_020 Hb_033546_020--Hb_007889_020 Hb_000311_040 Hb_000311_040 Hb_033546_020--Hb_000311_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
118.339 0 0 367.052 3.397 28.5062
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
268.748 40.5961 0 0 0

CAGE analysis