Hb_001377_300

Information

Type -
Description -
Location Contig1377: 294298-295893
Sequence    

Annotation

kegg
ID rcu:RCOM_0717960
description flavonoid 3-hydroxylase, putative (EC:1.14.13.88)
nr
ID XP_002523334.1
description flavonoid 3-hydroxylase, putative [Ricinus communis]
swissprot
ID Q9LNJ4
description Cytochrome P450 703A2 OS=Arabidopsis thaliana GN=CYP703A2 PE=2 SV=1
trembl
ID B9SBG5
description Flavonoid 3-hydroxylase, putative OS=Ricinus communis GN=RCOM_0717960 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 703a2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001377_300 0.0 - - flavonoid 3-hydroxylase, putative [Ricinus communis]
2 Hb_000375_140 0.2539727575 - - PREDICTED: monoacylglycerol lipase ABHD6 [Jatropha curcas]
3 Hb_033546_020 0.2612043259 - - xenotropic and polytropic murine leukemia virus receptor pho1, putative [Ricinus communis]
4 Hb_067118_010 0.2698586173 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
5 Hb_009222_110 0.2739913789 - - PREDICTED: RING-H2 finger protein ATL52-like [Jatropha curcas]
6 Hb_001488_390 0.2789153453 - - SP1L, putative [Ricinus communis]
7 Hb_000684_220 0.2797028307 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
8 Hb_000330_020 0.2839708096 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
9 Hb_000668_090 0.2912242069 - - senescence-associated family protein [Populus trichocarpa]
10 Hb_000200_070 0.2965133323 - - PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 1 isoform X1 [Jatropha curcas]
11 Hb_003623_040 0.2965795421 - - PREDICTED: xylosyltransferase 1-like [Jatropha curcas]
12 Hb_001195_130 0.2997295572 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000056_190 0.3003095678 - - hypothetical protein [Ricinus communis]
14 Hb_001998_170 0.3035696728 - - BnaC07g08230D [Brassica napus]
15 Hb_000236_160 0.3056313741 - - PREDICTED: UDP-glucuronate 4-epimerase 6 [Jatropha curcas]
16 Hb_003906_020 0.306302365 - - PREDICTED: uncharacterized protein LOC105648535 [Jatropha curcas]
17 Hb_003536_090 0.3077678568 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
18 Hb_000313_330 0.3079697563 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
19 Hb_000191_140 0.3092743474 - - PREDICTED: growth-regulating factor 1-like isoform X2 [Jatropha curcas]
20 Hb_000483_330 0.3102179891 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like [Jatropha curcas]

Gene co-expression network

sample Hb_001377_300 Hb_001377_300 Hb_000375_140 Hb_000375_140 Hb_001377_300--Hb_000375_140 Hb_033546_020 Hb_033546_020 Hb_001377_300--Hb_033546_020 Hb_067118_010 Hb_067118_010 Hb_001377_300--Hb_067118_010 Hb_009222_110 Hb_009222_110 Hb_001377_300--Hb_009222_110 Hb_001488_390 Hb_001488_390 Hb_001377_300--Hb_001488_390 Hb_000684_220 Hb_000684_220 Hb_001377_300--Hb_000684_220 Hb_002164_010 Hb_002164_010 Hb_000375_140--Hb_002164_010 Hb_002774_120 Hb_002774_120 Hb_000375_140--Hb_002774_120 Hb_000313_330 Hb_000313_330 Hb_000375_140--Hb_000313_330 Hb_002003_090 Hb_002003_090 Hb_000375_140--Hb_002003_090 Hb_107658_010 Hb_107658_010 Hb_000375_140--Hb_107658_010 Hb_003536_090 Hb_003536_090 Hb_000375_140--Hb_003536_090 Hb_001998_170 Hb_001998_170 Hb_033546_020--Hb_001998_170 Hb_113084_010 Hb_113084_010 Hb_033546_020--Hb_113084_010 Hb_003906_020 Hb_003906_020 Hb_033546_020--Hb_003906_020 Hb_007889_020 Hb_007889_020 Hb_033546_020--Hb_007889_020 Hb_000311_040 Hb_000311_040 Hb_033546_020--Hb_000311_040 Hb_067118_010--Hb_000313_330 Hb_067118_010--Hb_000375_140 Hb_006061_030 Hb_006061_030 Hb_067118_010--Hb_006061_030 Hb_003713_010 Hb_003713_010 Hb_067118_010--Hb_003713_010 Hb_146255_010 Hb_146255_010 Hb_067118_010--Hb_146255_010 Hb_002374_540 Hb_002374_540 Hb_067118_010--Hb_002374_540 Hb_000300_480 Hb_000300_480 Hb_009222_110--Hb_000300_480 Hb_005144_120 Hb_005144_120 Hb_009222_110--Hb_005144_120 Hb_000056_190 Hb_000056_190 Hb_009222_110--Hb_000056_190 Hb_001195_130 Hb_001195_130 Hb_009222_110--Hb_001195_130 Hb_000856_400 Hb_000856_400 Hb_009222_110--Hb_000856_400 Hb_006925_050 Hb_006925_050 Hb_009222_110--Hb_006925_050 Hb_001488_390--Hb_000056_190 Hb_001488_390--Hb_000684_220 Hb_000692_100 Hb_000692_100 Hb_001488_390--Hb_000692_100 Hb_003462_040 Hb_003462_040 Hb_001488_390--Hb_003462_040 Hb_105033_010 Hb_105033_010 Hb_001488_390--Hb_105033_010 Hb_001008_080 Hb_001008_080 Hb_001488_390--Hb_001008_080 Hb_030565_050 Hb_030565_050 Hb_000684_220--Hb_030565_050 Hb_000684_220--Hb_002774_120 Hb_000246_130 Hb_000246_130 Hb_000684_220--Hb_000246_130 Hb_000330_020 Hb_000330_020 Hb_000684_220--Hb_000330_020 Hb_000603_020 Hb_000603_020 Hb_000684_220--Hb_000603_020 Hb_000236_160 Hb_000236_160 Hb_000684_220--Hb_000236_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0652453 0.0144815 0.0444981 0.210598 0.0272322 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0331365 0 0 0 0.0544161

CAGE analysis