Hb_001008_080

Information

Type -
Description -
Location Contig1008: 67592-71959
Sequence    

Annotation

kegg
ID rcu:RCOM_0897920
description Acyl-protein thioesterase, putative (EC:3.1.1.1)
nr
ID XP_012073237.1
description PREDICTED: acyl-protein thioesterase 2 [Jatropha curcas]
swissprot
ID O95372
description Acyl-protein thioesterase 2 OS=Homo sapiens GN=LYPLA2 PE=1 SV=1
trembl
ID E6NUE0
description JHL25H03.13 protein OS=Jatropha curcas GN=JHL25H03.13 PE=4 SV=1
Gene Ontology
ID GO:0052689
description phospholipase carboxylesterase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001008_080 0.0 - - PREDICTED: acyl-protein thioesterase 2 [Jatropha curcas]
2 Hb_002495_030 0.111772257 - - PREDICTED: serine/threonine-protein kinase Nek6 isoform X2 [Jatropha curcas]
3 Hb_000003_580 0.1163172957 - - conserved hypothetical protein [Ricinus communis]
4 Hb_006750_010 0.1239738289 - - Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis]
5 Hb_020378_020 0.1276255359 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
6 Hb_001195_380 0.1282457145 - - PREDICTED: uncharacterized protein LOC105633781 [Jatropha curcas]
7 Hb_003086_030 0.1332952795 - - PREDICTED: fasciclin-like arabinogalactan protein 17 [Jatropha curcas]
8 Hb_009222_080 0.1336142703 - - RING-H2 finger protein ATL2J, putative [Ricinus communis]
9 Hb_010968_030 0.1357126137 - - PREDICTED: uncharacterized protein LOC105643149 [Jatropha curcas]
10 Hb_002284_060 0.1364075957 - - sugar transporter, putative [Ricinus communis]
11 Hb_012239_060 0.1384704669 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
12 Hb_004957_050 0.1394065706 - - hypothetical protein POPTR_0010s12360g [Populus trichocarpa]
13 Hb_010222_040 0.1395801232 - - PREDICTED: kinesin-2 [Jatropha curcas]
14 Hb_084147_010 0.1430929397 - - amino acid transporter, putative [Ricinus communis]
15 Hb_001001_070 0.1433387178 - - PREDICTED: uncharacterized protein LOC105633663 [Jatropha curcas]
16 Hb_000251_120 0.143911718 - - O-acetyltransferase, putative [Ricinus communis]
17 Hb_114917_010 0.1441328286 - - PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Jatropha curcas]
18 Hb_000392_540 0.1471510886 - - PREDICTED: hypersensitive-induced response protein 1 [Sesamum indicum]
19 Hb_000963_120 0.1484928241 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
20 Hb_002613_040 0.1487751395 - - phosphate translocator-related family protein [Populus trichocarpa]

Gene co-expression network

sample Hb_001008_080 Hb_001008_080 Hb_002495_030 Hb_002495_030 Hb_001008_080--Hb_002495_030 Hb_000003_580 Hb_000003_580 Hb_001008_080--Hb_000003_580 Hb_006750_010 Hb_006750_010 Hb_001008_080--Hb_006750_010 Hb_020378_020 Hb_020378_020 Hb_001008_080--Hb_020378_020 Hb_001195_380 Hb_001195_380 Hb_001008_080--Hb_001195_380 Hb_003086_030 Hb_003086_030 Hb_001008_080--Hb_003086_030 Hb_098795_030 Hb_098795_030 Hb_002495_030--Hb_098795_030 Hb_006615_230 Hb_006615_230 Hb_002495_030--Hb_006615_230 Hb_000580_110 Hb_000580_110 Hb_002495_030--Hb_000580_110 Hb_003052_080 Hb_003052_080 Hb_002495_030--Hb_003052_080 Hb_007590_100 Hb_007590_100 Hb_002495_030--Hb_007590_100 Hb_000003_580--Hb_003086_030 Hb_003125_210 Hb_003125_210 Hb_000003_580--Hb_003125_210 Hb_000103_300 Hb_000103_300 Hb_000003_580--Hb_000103_300 Hb_000457_120 Hb_000457_120 Hb_000003_580--Hb_000457_120 Hb_001936_120 Hb_001936_120 Hb_000003_580--Hb_001936_120 Hb_002284_060 Hb_002284_060 Hb_000003_580--Hb_002284_060 Hb_003462_040 Hb_003462_040 Hb_006750_010--Hb_003462_040 Hb_028396_020 Hb_028396_020 Hb_006750_010--Hb_028396_020 Hb_001369_010 Hb_001369_010 Hb_006750_010--Hb_001369_010 Hb_000820_110 Hb_000820_110 Hb_006750_010--Hb_000820_110 Hb_006750_010--Hb_001195_380 Hb_019516_060 Hb_019516_060 Hb_006750_010--Hb_019516_060 Hb_114917_010 Hb_114917_010 Hb_020378_020--Hb_114917_010 Hb_003006_090 Hb_003006_090 Hb_020378_020--Hb_003006_090 Hb_020378_020--Hb_028396_020 Hb_020378_020--Hb_006750_010 Hb_004241_110 Hb_004241_110 Hb_020378_020--Hb_004241_110 Hb_001195_380--Hb_000580_110 Hb_000251_120 Hb_000251_120 Hb_001195_380--Hb_000251_120 Hb_001195_380--Hb_002495_030 Hb_002596_080 Hb_002596_080 Hb_001195_380--Hb_002596_080 Hb_003086_030--Hb_003125_210 Hb_002894_080 Hb_002894_080 Hb_003086_030--Hb_002894_080 Hb_000030_130 Hb_000030_130 Hb_003086_030--Hb_000030_130 Hb_003086_030--Hb_019516_060 Hb_003086_030--Hb_000457_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.294124 3.41171 3.58594 14.5733 0.487284 0.157083
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.617345 0.591304 0.039863 2.60876 11.1017

CAGE analysis