Hb_000330_020

Information

Type -
Description -
Location Contig330: 31564-34142
Sequence    

Annotation

kegg
ID rcu:RCOM_1594880
description Isoflavone reductase, putative (EC:1.3.1.45)
nr
ID XP_012071888.1
description PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
swissprot
ID E1U332
description Isoflavone reductase-like protein OS=Olea europaea PE=1 SV=1
trembl
ID A0A067L351
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04449 PE=4 SV=1
Gene Ontology
ID GO:0047526
description phenylcoumaran benzylic ether reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_34687: 31559-33546 , PASA_asmbl_34688: 33768-33898
cDNA
(Sanger)
(ID:Location)		 004_C12.ab1: 31581-33143 , 005_N12.ab1: 33213-33484 , 009_M16.ab1: 31581-32961 , 013_J01.ab1: 31563-32956 , 033_N15.ab1: 31563-32957 , 049_O12.ab1: 31685-33148 , 050_P14.ab1: 31563-32911

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000330_020 0.0 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
2 Hb_000056_190 0.0870991445 - - hypothetical protein [Ricinus communis]
3 Hb_000684_220 0.143023375 - - PREDICTED: interactor of constitutive active ROPs 2, chloroplastic isoform X1 [Jatropha curcas]
4 Hb_030565_050 0.1440697954 - - UDP-D-GLUCURONATE 4-EPIMERASE 6 family protein [Populus trichocarpa]
5 Hb_012762_060 0.149201577 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
6 Hb_003680_030 0.1506977436 - - PREDICTED: aspartic proteinase-like protein 2 isoform X3 [Jatropha curcas]
7 Hb_000844_030 0.1551861166 - - ent-kaurene oxidase, putative [Ricinus communis]
8 Hb_000349_200 0.1589465791 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
9 Hb_011828_010 0.1590962402 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
10 Hb_002217_320 0.1595111504 - - PREDICTED: probable O-acetyltransferase CAS1 isoform X2 [Jatropha curcas]
11 Hb_116702_010 0.1620127183 - - Leucine-rich repeat protein kinase family protein [Theobroma cacao]
12 Hb_000424_030 0.1634963504 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000805_140 0.164303347 transcription factor TF Family: GRAS Chitin-inducible gibberellin-responsive protein, putative [Ricinus communis]
14 Hb_001195_130 0.1661506863 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000271_220 0.1682896259 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
16 Hb_001847_050 0.1684044246 - - hypothetical protein CISIN_1g019843mg [Citrus sinensis]
17 Hb_006829_070 0.1684616098 - - PREDICTED: uncharacterized protein LOC105632920 [Jatropha curcas]
18 Hb_000011_070 0.1696705277 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
19 Hb_001049_150 0.1702478477 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
20 Hb_001140_170 0.1704004969 - - PREDICTED: remorin [Jatropha curcas]

Gene co-expression network

sample Hb_000330_020 Hb_000330_020 Hb_000056_190 Hb_000056_190 Hb_000330_020--Hb_000056_190 Hb_000684_220 Hb_000684_220 Hb_000330_020--Hb_000684_220 Hb_030565_050 Hb_030565_050 Hb_000330_020--Hb_030565_050 Hb_012762_060 Hb_012762_060 Hb_000330_020--Hb_012762_060 Hb_003680_030 Hb_003680_030 Hb_000330_020--Hb_003680_030 Hb_000844_030 Hb_000844_030 Hb_000330_020--Hb_000844_030 Hb_003462_040 Hb_003462_040 Hb_000056_190--Hb_003462_040 Hb_000349_200 Hb_000349_200 Hb_000056_190--Hb_000349_200 Hb_000300_480 Hb_000300_480 Hb_000056_190--Hb_000300_480 Hb_000056_190--Hb_003680_030 Hb_000271_220 Hb_000271_220 Hb_000056_190--Hb_000271_220 Hb_000684_220--Hb_030565_050 Hb_002774_120 Hb_002774_120 Hb_000684_220--Hb_002774_120 Hb_000246_130 Hb_000246_130 Hb_000684_220--Hb_000246_130 Hb_000603_020 Hb_000603_020 Hb_000684_220--Hb_000603_020 Hb_000236_160 Hb_000236_160 Hb_000684_220--Hb_000236_160 Hb_014361_090 Hb_014361_090 Hb_030565_050--Hb_014361_090 Hb_004449_090 Hb_004449_090 Hb_030565_050--Hb_004449_090 Hb_005539_140 Hb_005539_140 Hb_030565_050--Hb_005539_140 Hb_000176_080 Hb_000176_080 Hb_030565_050--Hb_000176_080 Hb_030565_050--Hb_000603_020 Hb_012762_060--Hb_003680_030 Hb_002217_320 Hb_002217_320 Hb_012762_060--Hb_002217_320 Hb_006829_070 Hb_006829_070 Hb_012762_060--Hb_006829_070 Hb_002488_010 Hb_002488_010 Hb_012762_060--Hb_002488_010 Hb_002026_020 Hb_002026_020 Hb_012762_060--Hb_002026_020 Hb_000134_120 Hb_000134_120 Hb_012762_060--Hb_000134_120 Hb_003680_030--Hb_002217_320 Hb_012807_150 Hb_012807_150 Hb_003680_030--Hb_012807_150 Hb_003680_030--Hb_006829_070 Hb_003680_030--Hb_002488_010 Hb_000959_300 Hb_000959_300 Hb_003680_030--Hb_000959_300 Hb_010812_110 Hb_010812_110 Hb_000844_030--Hb_010812_110 Hb_004738_030 Hb_004738_030 Hb_000844_030--Hb_004738_030 Hb_001474_040 Hb_001474_040 Hb_000844_030--Hb_001474_040 Hb_000844_030--Hb_012762_060 Hb_000094_190 Hb_000094_190 Hb_000844_030--Hb_000094_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
144.472 276.344 319.095 1081.66 149.834 91.7853
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
82.5779 53.6209 35.638 28.6669 465.172

CAGE analysis