Hb_000349_200

Information

Type -
Description -
Location Contig349: 211836-212921
Sequence    

Annotation

kegg
ID pop:POPTR_0003s11790g
description POPTRDRAFT_646517; phosphate translocator-related family protein
nr
ID XP_012087057.1
description PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
swissprot
ID Q9LDH3
description Probable sugar phosphate/phosphate translocator At1g12500 OS=Arabidopsis thaliana GN=At1g12500 PE=1 SV=1
trembl
ID A0A067JZY7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20721 PE=4 SV=1
Gene Ontology
ID GO:0016021
description probable sugar phosphate phosphate translocator at1g12500

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_36312: 211754-214119
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000349_200 0.0 - - PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Jatropha curcas]
2 Hb_000271_220 0.1063428853 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
3 Hb_000011_070 0.1073516553 - - PREDICTED: CO(2)-response secreted protease-like [Jatropha curcas]
4 Hb_000603_020 0.1203601267 - - PREDICTED: uncharacterized protein LOC105638063 isoform X1 [Jatropha curcas]
5 Hb_003929_230 0.1252564184 - - PREDICTED: S-adenosylmethionine synthase 5 [Nelumbo nucifera]
6 Hb_003006_090 0.1256375501 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming] isoform X2 [Jatropha curcas]
7 Hb_000056_190 0.1302723697 - - hypothetical protein [Ricinus communis]
8 Hb_012807_150 0.1315397442 - - PREDICTED: alpha-L-fucosidase 1 [Jatropha curcas]
9 Hb_004007_070 0.1342166296 - - adenylsulfate kinase, putative [Ricinus communis]
10 Hb_000086_090 0.1382980934 - - PREDICTED: U-box domain-containing protein 3 [Jatropha curcas]
11 Hb_000283_140 0.1413395451 - - PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Jatropha curcas]
12 Hb_012395_110 0.1413725177 - - PREDICTED: peroxygenase [Jatropha curcas]
13 Hb_003001_130 0.1429486773 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003462_040 0.1493787443 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
15 Hb_000227_280 0.1501583527 - - PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Jatropha curcas]
16 Hb_001847_050 0.1505225415 - - hypothetical protein CISIN_1g019843mg [Citrus sinensis]
17 Hb_000109_190 0.1542462976 - - PREDICTED: RING-H2 finger protein ATL47 [Jatropha curcas]
18 Hb_011828_010 0.1544616948 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Jatropha curcas]
19 Hb_116702_010 0.156013534 - - Leucine-rich repeat protein kinase family protein [Theobroma cacao]
20 Hb_002217_320 0.1563629327 - - PREDICTED: probable O-acetyltransferase CAS1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_000349_200 Hb_000349_200 Hb_000271_220 Hb_000271_220 Hb_000349_200--Hb_000271_220 Hb_000011_070 Hb_000011_070 Hb_000349_200--Hb_000011_070 Hb_000603_020 Hb_000603_020 Hb_000349_200--Hb_000603_020 Hb_003929_230 Hb_003929_230 Hb_000349_200--Hb_003929_230 Hb_003006_090 Hb_003006_090 Hb_000349_200--Hb_003006_090 Hb_000056_190 Hb_000056_190 Hb_000349_200--Hb_000056_190 Hb_000271_220--Hb_000603_020 Hb_012807_150 Hb_012807_150 Hb_000271_220--Hb_012807_150 Hb_000283_140 Hb_000283_140 Hb_000271_220--Hb_000283_140 Hb_000271_220--Hb_003006_090 Hb_003001_130 Hb_003001_130 Hb_000271_220--Hb_003001_130 Hb_000011_070--Hb_000271_220 Hb_000011_070--Hb_000603_020 Hb_011828_010 Hb_011828_010 Hb_000011_070--Hb_011828_010 Hb_000011_070--Hb_003929_230 Hb_000071_160 Hb_000071_160 Hb_000011_070--Hb_000071_160 Hb_000603_020--Hb_003001_130 Hb_000603_020--Hb_012807_150 Hb_000603_020--Hb_000283_140 Hb_000320_350 Hb_000320_350 Hb_000603_020--Hb_000320_350 Hb_000424_030 Hb_000424_030 Hb_000603_020--Hb_000424_030 Hb_003929_230--Hb_003001_130 Hb_001318_100 Hb_001318_100 Hb_003929_230--Hb_001318_100 Hb_005408_100 Hb_005408_100 Hb_003929_230--Hb_005408_100 Hb_000109_190 Hb_000109_190 Hb_003929_230--Hb_000109_190 Hb_003929_230--Hb_000603_020 Hb_002542_060 Hb_002542_060 Hb_003006_090--Hb_002542_060 Hb_003462_040 Hb_003462_040 Hb_003006_090--Hb_003462_040 Hb_001195_660 Hb_001195_660 Hb_003006_090--Hb_001195_660 Hb_001677_040 Hb_001677_040 Hb_003006_090--Hb_001677_040 Hb_003006_090--Hb_000603_020 Hb_000330_020 Hb_000330_020 Hb_000056_190--Hb_000330_020 Hb_000056_190--Hb_003462_040 Hb_000300_480 Hb_000300_480 Hb_000056_190--Hb_000300_480 Hb_003680_030 Hb_003680_030 Hb_000056_190--Hb_003680_030 Hb_000056_190--Hb_000271_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.4509 14.2296 16.4505 36.8841 0.957438 2.61146
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.02104 1.58414 3.46372 2.51453 22.2942

CAGE analysis