Hb_000844_030

Information

Type -
Description -
Location Contig844: 56548-59719
Sequence    

Annotation

kegg
ID rcu:RCOM_1592560
description ent-kaurene oxidase, putative (EC:1.14.13.78)
nr
ID XP_002510288.1
description ent-kaurene oxidase, putative [Ricinus communis]
swissprot
ID Q93ZB2
description Ent-kaurene oxidase, chloroplastic OS=Arabidopsis thaliana GN=KO PE=1 SV=2
trembl
ID B9R7J5
description Ent-kaurene oxidase, putative OS=Ricinus communis GN=RCOM_1592560 PE=3 SV=1
Gene Ontology
ID GO:0005783
description ent-kaurene chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_60176: 56566-57677 , PASA_asmbl_60177: 58060-58299 , PASA_asmbl_60178: 59296-59761
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000844_030 0.0 - - ent-kaurene oxidase, putative [Ricinus communis]
2 Hb_010812_110 0.1409471434 - - putative plant disease resistance family protein [Populus trichocarpa]
3 Hb_000330_020 0.1551861166 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
4 Hb_004738_030 0.1606018024 - - Inactive protein kinase [Gossypium arboreum]
5 Hb_001474_040 0.1662965918 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 [Jatropha curcas]
6 Hb_012762_060 0.1702560323 - - Vitellogenic carboxypeptidase, putative [Ricinus communis]
7 Hb_000094_190 0.1744051965 - - PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Jatropha curcas]
8 Hb_004374_130 0.1802147498 - - PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Jatropha curcas]
9 Hb_001754_060 0.1817710094 - - Xyloglucan 6-xylosyltransferase, putative [Ricinus communis]
10 Hb_009189_020 0.1826386192 - - PREDICTED: CASP-like protein 4B4 [Jatropha curcas]
11 Hb_000665_190 0.1962665289 - - conserved hypothetical protein [Ricinus communis]
12 Hb_002374_550 0.1980525239 - - PREDICTED: aspartic proteinase nepenthesin-1 [Jatropha curcas]
13 Hb_002311_190 0.1996762985 - - PREDICTED: uncharacterized protein LOC105643493 [Jatropha curcas]
14 Hb_001349_030 0.200243951 - - PREDICTED: uncharacterized protein LOC105641975 isoform X1 [Jatropha curcas]
15 Hb_002026_020 0.2007766756 - - hypothetical protein POPTR_0012s129501g, partial [Populus trichocarpa]
16 Hb_145317_010 0.201991285 - - PREDICTED: transmembrane 9 superfamily member 11 [Jatropha curcas]
17 Hb_001217_040 0.2022295087 - - hypothetical protein MIMGU_mgv1a0002421mg, partial [Erythranthe guttata]
18 Hb_000703_100 0.2031598765 - - PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like [Jatropha curcas]
19 Hb_009222_070 0.203451143 - - PREDICTED: xylosyltransferase 2 [Jatropha curcas]
20 Hb_008054_050 0.2035206248 - - PREDICTED: uncharacterized protein LOC101212042 [Cucumis sativus]

Gene co-expression network

sample Hb_000844_030 Hb_000844_030 Hb_010812_110 Hb_010812_110 Hb_000844_030--Hb_010812_110 Hb_000330_020 Hb_000330_020 Hb_000844_030--Hb_000330_020 Hb_004738_030 Hb_004738_030 Hb_000844_030--Hb_004738_030 Hb_001474_040 Hb_001474_040 Hb_000844_030--Hb_001474_040 Hb_012762_060 Hb_012762_060 Hb_000844_030--Hb_012762_060 Hb_000094_190 Hb_000094_190 Hb_000844_030--Hb_000094_190 Hb_010812_110--Hb_001474_040 Hb_026740_020 Hb_026740_020 Hb_010812_110--Hb_026740_020 Hb_000226_070 Hb_000226_070 Hb_010812_110--Hb_000226_070 Hb_014497_040 Hb_014497_040 Hb_010812_110--Hb_014497_040 Hb_005941_030 Hb_005941_030 Hb_010812_110--Hb_005941_030 Hb_000056_190 Hb_000056_190 Hb_000330_020--Hb_000056_190 Hb_000684_220 Hb_000684_220 Hb_000330_020--Hb_000684_220 Hb_030565_050 Hb_030565_050 Hb_000330_020--Hb_030565_050 Hb_000330_020--Hb_012762_060 Hb_003680_030 Hb_003680_030 Hb_000330_020--Hb_003680_030 Hb_002311_190 Hb_002311_190 Hb_004738_030--Hb_002311_190 Hb_009222_070 Hb_009222_070 Hb_004738_030--Hb_009222_070 Hb_001349_030 Hb_001349_030 Hb_004738_030--Hb_001349_030 Hb_002053_050 Hb_002053_050 Hb_004738_030--Hb_002053_050 Hb_000503_020 Hb_000503_020 Hb_004738_030--Hb_000503_020 Hb_000665_190 Hb_000665_190 Hb_004738_030--Hb_000665_190 Hb_000281_060 Hb_000281_060 Hb_001474_040--Hb_000281_060 Hb_002498_050 Hb_002498_050 Hb_001474_040--Hb_002498_050 Hb_000818_100 Hb_000818_100 Hb_001474_040--Hb_000818_100 Hb_001474_040--Hb_000226_070 Hb_012762_060--Hb_003680_030 Hb_002217_320 Hb_002217_320 Hb_012762_060--Hb_002217_320 Hb_006829_070 Hb_006829_070 Hb_012762_060--Hb_006829_070 Hb_002488_010 Hb_002488_010 Hb_012762_060--Hb_002488_010 Hb_002026_020 Hb_002026_020 Hb_012762_060--Hb_002026_020 Hb_000134_120 Hb_000134_120 Hb_012762_060--Hb_000134_120 Hb_000094_190--Hb_012762_060 Hb_001754_060 Hb_001754_060 Hb_000094_190--Hb_001754_060 Hb_000094_190--Hb_002026_020 Hb_000914_050 Hb_000914_050 Hb_000094_190--Hb_000914_050 Hb_002374_550 Hb_002374_550 Hb_000094_190--Hb_002374_550
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.01116 7.28265 5.38519 20.5629 6.58733 4.65033
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.33495 1.07336 0.662814 0.575653 5.95071

CAGE analysis