Hb_107658_010

Information

Type -
Description -
Location Contig107658: 1287-2095
Sequence    

Annotation

kegg
ID rcu:RCOM_0555410
description protein binding protein, putative
nr
ID XP_012082689.1
description PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X2 [Jatropha curcas]
swissprot
ID Q9SA69
description BTB/POZ domain-containing protein At1g03010 OS=Arabidopsis thaliana GN=At1g03010 PE=2 SV=1
trembl
ID B9S3V0
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_0555410 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_107658_010 0.0 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X2 [Jatropha curcas]
2 Hb_000011_260 0.1149653783 - - conserved hypothetical protein [Ricinus communis]
3 Hb_150573_010 0.1236475896 transcription factor TF Family: LIM Cysteine and glycine-rich protein, putative [Ricinus communis]
4 Hb_001369_190 0.1256888291 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]
5 Hb_036029_020 0.1265388869 - - PREDICTED: patellin-3-like [Jatropha curcas]
6 Hb_004732_070 0.1266989438 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004453_060 0.133275624 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
8 Hb_001675_290 0.1381633329 - - PREDICTED: transcription factor bHLH68-like isoform X1 [Jatropha curcas]
9 Hb_007749_020 0.138665621 - - receptor-kinase, putative [Ricinus communis]
10 Hb_000270_790 0.1399711444 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
11 Hb_000310_040 0.146565769 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
12 Hb_000922_050 0.1517182311 - - PREDICTED: serine/threonine-protein kinase HT1-like [Jatropha curcas]
13 Hb_006088_020 0.1529688396 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
14 Hb_004970_100 0.1550934521 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
15 Hb_002918_270 0.1553096132 - - PREDICTED: protein E6-like [Populus euphratica]
16 Hb_002417_010 0.1572127264 - - PREDICTED: ankyrin repeat-containing protein At5g02620-like [Jatropha curcas]
17 Hb_020831_060 0.1598306489 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
18 Hb_084304_010 0.1624665087 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
19 Hb_011120_030 0.1629408975 - - PREDICTED: uncharacterized protein LOC105638239 [Jatropha curcas]
20 Hb_025194_070 0.1638886234 - - PREDICTED: ACT domain-containing protein ACR4-like [Jatropha curcas]

Gene co-expression network

sample Hb_107658_010 Hb_107658_010 Hb_000011_260 Hb_000011_260 Hb_107658_010--Hb_000011_260 Hb_150573_010 Hb_150573_010 Hb_107658_010--Hb_150573_010 Hb_001369_190 Hb_001369_190 Hb_107658_010--Hb_001369_190 Hb_036029_020 Hb_036029_020 Hb_107658_010--Hb_036029_020 Hb_004732_070 Hb_004732_070 Hb_107658_010--Hb_004732_070 Hb_004453_060 Hb_004453_060 Hb_107658_010--Hb_004453_060 Hb_020831_060 Hb_020831_060 Hb_000011_260--Hb_020831_060 Hb_000011_260--Hb_001369_190 Hb_004970_100 Hb_004970_100 Hb_000011_260--Hb_004970_100 Hb_000270_790 Hb_000270_790 Hb_000011_260--Hb_000270_790 Hb_006088_020 Hb_006088_020 Hb_000011_260--Hb_006088_020 Hb_150573_010--Hb_004453_060 Hb_009070_010 Hb_009070_010 Hb_150573_010--Hb_009070_010 Hb_000227_300 Hb_000227_300 Hb_150573_010--Hb_000227_300 Hb_051408_010 Hb_051408_010 Hb_150573_010--Hb_051408_010 Hb_000922_050 Hb_000922_050 Hb_150573_010--Hb_000922_050 Hb_004558_060 Hb_004558_060 Hb_001369_190--Hb_004558_060 Hb_001369_190--Hb_006088_020 Hb_002918_270 Hb_002918_270 Hb_001369_190--Hb_002918_270 Hb_003607_080 Hb_003607_080 Hb_001369_190--Hb_003607_080 Hb_005215_050 Hb_005215_050 Hb_001369_190--Hb_005215_050 Hb_000849_030 Hb_000849_030 Hb_001369_190--Hb_000849_030 Hb_071433_010 Hb_071433_010 Hb_036029_020--Hb_071433_010 Hb_001675_290 Hb_001675_290 Hb_036029_020--Hb_001675_290 Hb_007749_020 Hb_007749_020 Hb_036029_020--Hb_007749_020 Hb_000172_230 Hb_000172_230 Hb_036029_020--Hb_000172_230 Hb_002597_030 Hb_002597_030 Hb_036029_020--Hb_002597_030 Hb_036029_020--Hb_004970_100 Hb_000310_040 Hb_000310_040 Hb_004732_070--Hb_000310_040 Hb_000190_160 Hb_000190_160 Hb_004732_070--Hb_000190_160 Hb_039075_010 Hb_039075_010 Hb_004732_070--Hb_039075_010 Hb_003777_150 Hb_003777_150 Hb_004732_070--Hb_003777_150 Hb_000270_050 Hb_000270_050 Hb_004732_070--Hb_000270_050 Hb_030360_010 Hb_030360_010 Hb_004732_070--Hb_030360_010 Hb_004453_060--Hb_004732_070 Hb_025194_070 Hb_025194_070 Hb_004453_060--Hb_025194_070 Hb_004453_060--Hb_036029_020 Hb_003427_070 Hb_003427_070 Hb_004453_060--Hb_003427_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.439786 1.4441 3.03782 7.82136 0.226006 0.0896731
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.348037 0.728394

CAGE analysis