Hb_020831_060

Information

Type -
Description -
Location Contig20831: 51402-55283
Sequence    

Annotation

kegg
ID rcu:RCOM_1300600
description hypothetical protein
nr
ID XP_012068476.1
description PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
swissprot
ID Q6F2Y7
description Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica GN=CLPB1 PE=2 SV=1
trembl
ID A0A067L9D6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03245 PE=4 SV=1
Gene Ontology
ID GO:0016787
description double clp-n motif-containing p-loop nucleoside triphosphate hydrolases superfamily

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_21581: 54542-54762
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_020831_060 0.0 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
2 Hb_000011_260 0.0904933413 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004970_100 0.1132573792 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]
4 Hb_019299_020 0.1199888284 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
5 Hb_000000_300 0.1211489814 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
6 Hb_000236_210 0.1231211146 - - hypothetical protein JCGZ_01083 [Jatropha curcas]
7 Hb_003777_150 0.1329579622 - - PREDICTED: uncharacterized protein LOC105640938 isoform X1 [Jatropha curcas]
8 Hb_001300_030 0.1329944319 - - hypothetical protein JCGZ_13871 [Jatropha curcas]
9 Hb_000740_080 0.1373500466 - - -
10 Hb_000206_270 0.1375492169 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
11 Hb_000220_020 0.1404899487 - - hypothetical protein CICLE_v10017575mg [Citrus clementina]
12 Hb_084304_010 0.1416398251 - - PREDICTED: probable auxin efflux carrier component 1c isoform X2 [Jatropha curcas]
13 Hb_001269_100 0.1429017148 - - plasma membrane ATPase 1, partial [Triticum aestivum]
14 Hb_001418_050 0.1430460124 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
15 Hb_000270_790 0.1445142426 - - hypothetical protein JCGZ_11498 [Jatropha curcas]
16 Hb_002768_040 0.1461085881 - - conserved hypothetical protein [Ricinus communis]
17 Hb_003464_100 0.1466665017 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
18 Hb_000628_060 0.1483151387 - - PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
19 Hb_010863_020 0.1485477236 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
20 Hb_001369_190 0.1531593078 - - PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Jatropha curcas]

Gene co-expression network

sample Hb_020831_060 Hb_020831_060 Hb_000011_260 Hb_000011_260 Hb_020831_060--Hb_000011_260 Hb_004970_100 Hb_004970_100 Hb_020831_060--Hb_004970_100 Hb_019299_020 Hb_019299_020 Hb_020831_060--Hb_019299_020 Hb_000000_300 Hb_000000_300 Hb_020831_060--Hb_000000_300 Hb_000236_210 Hb_000236_210 Hb_020831_060--Hb_000236_210 Hb_003777_150 Hb_003777_150 Hb_020831_060--Hb_003777_150 Hb_107658_010 Hb_107658_010 Hb_000011_260--Hb_107658_010 Hb_001369_190 Hb_001369_190 Hb_000011_260--Hb_001369_190 Hb_000011_260--Hb_004970_100 Hb_000270_790 Hb_000270_790 Hb_000011_260--Hb_000270_790 Hb_006088_020 Hb_006088_020 Hb_000011_260--Hb_006088_020 Hb_006026_020 Hb_006026_020 Hb_004970_100--Hb_006026_020 Hb_004970_100--Hb_003777_150 Hb_005214_050 Hb_005214_050 Hb_004970_100--Hb_005214_050 Hb_000373_260 Hb_000373_260 Hb_004970_100--Hb_000373_260 Hb_001417_090 Hb_001417_090 Hb_004970_100--Hb_001417_090 Hb_004031_050 Hb_004031_050 Hb_004970_100--Hb_004031_050 Hb_000139_460 Hb_000139_460 Hb_019299_020--Hb_000139_460 Hb_000740_080 Hb_000740_080 Hb_019299_020--Hb_000740_080 Hb_002304_110 Hb_002304_110 Hb_019299_020--Hb_002304_110 Hb_001257_140 Hb_001257_140 Hb_019299_020--Hb_001257_140 Hb_010863_020 Hb_010863_020 Hb_019299_020--Hb_010863_020 Hb_000352_360 Hb_000352_360 Hb_019299_020--Hb_000352_360 Hb_001300_030 Hb_001300_030 Hb_000000_300--Hb_001300_030 Hb_002768_040 Hb_002768_040 Hb_000000_300--Hb_002768_040 Hb_002627_010 Hb_002627_010 Hb_000000_300--Hb_002627_010 Hb_027405_010 Hb_027405_010 Hb_000000_300--Hb_027405_010 Hb_001322_010 Hb_001322_010 Hb_000000_300--Hb_001322_010 Hb_003464_100 Hb_003464_100 Hb_000236_210--Hb_003464_100 Hb_000635_020 Hb_000635_020 Hb_000236_210--Hb_000635_020 Hb_003893_060 Hb_003893_060 Hb_000236_210--Hb_003893_060 Hb_000236_210--Hb_019299_020 Hb_000220_020 Hb_000220_020 Hb_000236_210--Hb_000220_020 Hb_084304_010 Hb_084304_010 Hb_003777_150--Hb_084304_010 Hb_003427_070 Hb_003427_070 Hb_003777_150--Hb_003427_070 Hb_000628_060 Hb_000628_060 Hb_003777_150--Hb_000628_060 Hb_004474_020 Hb_004474_020 Hb_003777_150--Hb_004474_020 Hb_069384_010 Hb_069384_010 Hb_003777_150--Hb_069384_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.209617 0.767944 1.15119 6.75721 0.0530687 0.056694
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.011243 0.0430243 0.481562 0.407904

CAGE analysis