Hb_000000_300

Information

Type -
Description -
Location Contig0: 527761-528981
Sequence    

Annotation

kegg
ID pop:POPTR_0014s04020g
description hypothetical protein
nr
ID XP_012071775.1
description PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
swissprot
ID P28493
description Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1
trembl
ID A0A067KQP6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04387 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_00073: 527867-527971 , PASA_asmbl_00074: 527879-528367
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000000_300 0.0 - - PREDICTED: pathogenesis-related protein 5 [Jatropha curcas]
2 Hb_020831_060 0.1211489814 - - PREDICTED: uncharacterized protein LOC105631088 [Jatropha curcas]
3 Hb_001300_030 0.1233037753 - - hypothetical protein JCGZ_13871 [Jatropha curcas]
4 Hb_002768_040 0.1242078745 - - conserved hypothetical protein [Ricinus communis]
5 Hb_002627_010 0.1258359118 - - PREDICTED: uncharacterized protein LOC105640888 [Jatropha curcas]
6 Hb_027405_010 0.1281848748 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
7 Hb_001322_010 0.1301750042 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
8 Hb_000740_080 0.1314131122 - - -
9 Hb_000897_010 0.1319934058 - - hypothetical protein JCGZ_13196 [Jatropha curcas]
10 Hb_005056_120 0.1346930748 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_005215_050 0.1350342841 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Jatropha curcas]
12 Hb_120040_010 0.1355568343 - - PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
13 Hb_010863_020 0.1357337419 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
14 Hb_000378_030 0.1402224255 - - conserved hypothetical protein [Ricinus communis]
15 Hb_022693_090 0.1415266013 - - glycosyltransferase, putative [Ricinus communis]
16 Hb_022597_010 0.1418314379 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
17 Hb_019299_020 0.1437400657 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
18 Hb_001257_140 0.1443623853 - - Gb:AAF02129.1, putative [Theobroma cacao]
19 Hb_000149_020 0.1478651545 - - Proline-rich receptor-like protein kinase PERK14 [Glycine soja]
20 Hb_004970_100 0.1503849697 transcription factor TF Family: HSF PREDICTED: heat stress transcription factor B-4 [Jatropha curcas]

Gene co-expression network

sample Hb_000000_300 Hb_000000_300 Hb_020831_060 Hb_020831_060 Hb_000000_300--Hb_020831_060 Hb_001300_030 Hb_001300_030 Hb_000000_300--Hb_001300_030 Hb_002768_040 Hb_002768_040 Hb_000000_300--Hb_002768_040 Hb_002627_010 Hb_002627_010 Hb_000000_300--Hb_002627_010 Hb_027405_010 Hb_027405_010 Hb_000000_300--Hb_027405_010 Hb_001322_010 Hb_001322_010 Hb_000000_300--Hb_001322_010 Hb_000011_260 Hb_000011_260 Hb_020831_060--Hb_000011_260 Hb_004970_100 Hb_004970_100 Hb_020831_060--Hb_004970_100 Hb_019299_020 Hb_019299_020 Hb_020831_060--Hb_019299_020 Hb_000236_210 Hb_000236_210 Hb_020831_060--Hb_000236_210 Hb_003777_150 Hb_003777_150 Hb_020831_060--Hb_003777_150 Hb_011344_050 Hb_011344_050 Hb_001300_030--Hb_011344_050 Hb_001296_010 Hb_001296_010 Hb_001300_030--Hb_001296_010 Hb_010863_020 Hb_010863_020 Hb_001300_030--Hb_010863_020 Hb_000920_120 Hb_000920_120 Hb_001300_030--Hb_000920_120 Hb_000959_170 Hb_000959_170 Hb_001300_030--Hb_000959_170 Hb_013399_060 Hb_013399_060 Hb_001300_030--Hb_013399_060 Hb_005056_120 Hb_005056_120 Hb_002768_040--Hb_005056_120 Hb_002768_040--Hb_027405_010 Hb_003607_080 Hb_003607_080 Hb_002768_040--Hb_003607_080 Hb_000897_010 Hb_000897_010 Hb_002768_040--Hb_000897_010 Hb_000740_080 Hb_000740_080 Hb_002768_040--Hb_000740_080 Hb_000352_360 Hb_000352_360 Hb_002768_040--Hb_000352_360 Hb_034688_030 Hb_034688_030 Hb_002627_010--Hb_034688_030 Hb_002592_070 Hb_002592_070 Hb_002627_010--Hb_002592_070 Hb_002627_010--Hb_027405_010 Hb_022693_090 Hb_022693_090 Hb_002627_010--Hb_022693_090 Hb_061054_010 Hb_061054_010 Hb_002627_010--Hb_061054_010 Hb_001775_060 Hb_001775_060 Hb_002627_010--Hb_001775_060 Hb_002384_030 Hb_002384_030 Hb_027405_010--Hb_002384_030 Hb_000076_280 Hb_000076_280 Hb_027405_010--Hb_000076_280 Hb_001117_180 Hb_001117_180 Hb_027405_010--Hb_001117_180 Hb_000453_290 Hb_000453_290 Hb_027405_010--Hb_000453_290 Hb_027400_020 Hb_027400_020 Hb_027405_010--Hb_027400_020 Hb_002370_050 Hb_002370_050 Hb_027405_010--Hb_002370_050 Hb_022597_010 Hb_022597_010 Hb_001322_010--Hb_022597_010 Hb_000860_030 Hb_000860_030 Hb_001322_010--Hb_000860_030 Hb_000705_070 Hb_000705_070 Hb_001322_010--Hb_000705_070 Hb_156850_040 Hb_156850_040 Hb_001322_010--Hb_156850_040 Hb_000638_110 Hb_000638_110 Hb_001322_010--Hb_000638_110 Hb_001322_010--Hb_000740_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.227199 1.58588 1.18951 9.96131 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.150447 1.00448 1.00315

CAGE analysis