Hb_156850_040

Information

Type -
Description -
Location Contig156850: 26447-29536
Sequence    

Annotation

kegg
ID rcu:RCOM_1600670
description hypothetical protein
nr
ID XP_012073678.1
description PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KX37
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08121 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_156850_040 0.0 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
2 Hb_001322_010 0.1094876426 - - PREDICTED: uncharacterized protein LOC105632322 [Jatropha curcas]
3 Hb_000860_030 0.1241273044 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000638_110 0.1262043964 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
5 Hb_022597_010 0.1367561303 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
6 Hb_002277_020 0.1397097414 - - Uncharacterized protein TCM_002409 [Theobroma cacao]
7 Hb_003582_010 0.141673116 - - hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
8 Hb_004757_040 0.1424511827 - - -
9 Hb_001013_070 0.1443164727 - - -
10 Hb_000705_070 0.145727266 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004617_010 0.1480476123 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
12 Hb_001255_030 0.1481339753 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
13 Hb_003212_030 0.1582602939 - - multidrug resistance pump, putative [Ricinus communis]
14 Hb_000086_160 0.1585189581 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
15 Hb_000027_010 0.1595516384 - - -
16 Hb_103632_010 0.1611235158 - - triacylglycerol lipase, putative [Ricinus communis]
17 Hb_002837_150 0.1616885948 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
18 Hb_000172_150 0.1626636734 - - PREDICTED: protein UPSTREAM OF FLC [Populus euphratica]
19 Hb_000206_270 0.1633253052 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
20 Hb_000710_130 0.1635758036 - - metal ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_156850_040 Hb_156850_040 Hb_001322_010 Hb_001322_010 Hb_156850_040--Hb_001322_010 Hb_000860_030 Hb_000860_030 Hb_156850_040--Hb_000860_030 Hb_000638_110 Hb_000638_110 Hb_156850_040--Hb_000638_110 Hb_022597_010 Hb_022597_010 Hb_156850_040--Hb_022597_010 Hb_002277_020 Hb_002277_020 Hb_156850_040--Hb_002277_020 Hb_003582_010 Hb_003582_010 Hb_156850_040--Hb_003582_010 Hb_001322_010--Hb_022597_010 Hb_001322_010--Hb_000860_030 Hb_000705_070 Hb_000705_070 Hb_001322_010--Hb_000705_070 Hb_001322_010--Hb_000638_110 Hb_000740_080 Hb_000740_080 Hb_001322_010--Hb_000740_080 Hb_000860_030--Hb_000705_070 Hb_000860_030--Hb_022597_010 Hb_001255_030 Hb_001255_030 Hb_000860_030--Hb_001255_030 Hb_000172_150 Hb_000172_150 Hb_000860_030--Hb_000172_150 Hb_001141_010 Hb_001141_010 Hb_000638_110--Hb_001141_010 Hb_103632_010 Hb_103632_010 Hb_000638_110--Hb_103632_010 Hb_002835_120 Hb_002835_120 Hb_000638_110--Hb_002835_120 Hb_004757_040 Hb_004757_040 Hb_000638_110--Hb_004757_040 Hb_002837_150 Hb_002837_150 Hb_000638_110--Hb_002837_150 Hb_000897_010 Hb_000897_010 Hb_022597_010--Hb_000897_010 Hb_022597_010--Hb_000638_110 Hb_005245_030 Hb_005245_030 Hb_022597_010--Hb_005245_030 Hb_005736_110 Hb_005736_110 Hb_022597_010--Hb_005736_110 Hb_029508_040 Hb_029508_040 Hb_002277_020--Hb_029508_040 Hb_000186_090 Hb_000186_090 Hb_002277_020--Hb_000186_090 Hb_000710_130 Hb_000710_130 Hb_002277_020--Hb_000710_130 Hb_000027_010 Hb_000027_010 Hb_002277_020--Hb_000027_010 Hb_074100_010 Hb_074100_010 Hb_002277_020--Hb_074100_010 Hb_002894_020 Hb_002894_020 Hb_002277_020--Hb_002894_020 Hb_008385_010 Hb_008385_010 Hb_003582_010--Hb_008385_010 Hb_001013_070 Hb_001013_070 Hb_003582_010--Hb_001013_070 Hb_002511_050 Hb_002511_050 Hb_003582_010--Hb_002511_050 Hb_003582_010--Hb_000705_070 Hb_003582_010--Hb_001322_010 Hb_001013_060 Hb_001013_060 Hb_003582_010--Hb_001013_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0508498 1.03287 0.20332 5.45531 0.070711 0.0177295
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0632497 0.0165893 0.0315089 0.263848 0.105362

CAGE analysis