Hb_004757_040

Information

Type -
Description -
Location Contig4757: 45119-45540
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_44497: 45079-45237
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004757_040 0.0 - - -
2 Hb_103632_010 0.098616724 - - triacylglycerol lipase, putative [Ricinus communis]
3 Hb_000638_110 0.1025431988 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
4 Hb_001141_010 0.1041754552 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
5 Hb_001255_030 0.1059765778 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
6 Hb_000245_070 0.1122946404 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
7 Hb_002837_150 0.1131784992 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
8 Hb_000007_020 0.1186471487 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
9 Hb_004125_080 0.1206950725 - - PREDICTED: dCTP pyrophosphatase 1-like [Populus euphratica]
10 Hb_000840_220 0.1311316671 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
11 Hb_001269_440 0.1319755333 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
12 Hb_001502_010 0.1322588996 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
13 Hb_002374_070 0.1378035176 - - amino acid transporter, putative [Ricinus communis]
14 Hb_006590_040 0.1383668615 - - amino acid permease, putative [Ricinus communis]
15 Hb_003582_010 0.1388651001 - - hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
16 Hb_008200_010 0.1392346373 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
17 Hb_002835_120 0.1417549672 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
18 Hb_156850_040 0.1424511827 - - PREDICTED: uncharacterized protein LOC105635251 [Jatropha curcas]
19 Hb_000705_070 0.1427377453 - - conserved hypothetical protein [Ricinus communis]
20 Hb_001013_070 0.143352579 - - -

Gene co-expression network

sample Hb_004757_040 Hb_004757_040 Hb_103632_010 Hb_103632_010 Hb_004757_040--Hb_103632_010 Hb_000638_110 Hb_000638_110 Hb_004757_040--Hb_000638_110 Hb_001141_010 Hb_001141_010 Hb_004757_040--Hb_001141_010 Hb_001255_030 Hb_001255_030 Hb_004757_040--Hb_001255_030 Hb_000245_070 Hb_000245_070 Hb_004757_040--Hb_000245_070 Hb_002837_150 Hb_002837_150 Hb_004757_040--Hb_002837_150 Hb_103632_010--Hb_002837_150 Hb_103632_010--Hb_001141_010 Hb_103632_010--Hb_000638_110 Hb_103632_010--Hb_001255_030 Hb_000007_020 Hb_000007_020 Hb_103632_010--Hb_000007_020 Hb_000638_110--Hb_001141_010 Hb_002835_120 Hb_002835_120 Hb_000638_110--Hb_002835_120 Hb_000638_110--Hb_002837_150 Hb_001322_010 Hb_001322_010 Hb_000638_110--Hb_001322_010 Hb_001141_010--Hb_002837_150 Hb_001141_010--Hb_002835_120 Hb_001269_440 Hb_001269_440 Hb_001141_010--Hb_001269_440 Hb_027402_110 Hb_027402_110 Hb_001255_030--Hb_027402_110 Hb_001255_030--Hb_002837_150 Hb_001675_260 Hb_001675_260 Hb_001255_030--Hb_001675_260 Hb_000860_030 Hb_000860_030 Hb_001255_030--Hb_000860_030 Hb_000245_070--Hb_000007_020 Hb_000245_070--Hb_001269_440 Hb_000245_070--Hb_002835_120 Hb_006590_040 Hb_006590_040 Hb_000245_070--Hb_006590_040 Hb_008200_010 Hb_008200_010 Hb_000245_070--Hb_008200_010 Hb_002837_150--Hb_001269_440 Hb_003212_030 Hb_003212_030 Hb_002837_150--Hb_003212_030 Hb_004617_010 Hb_004617_010 Hb_002837_150--Hb_004617_010 Hb_002837_150--Hb_002835_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.78717 0.165601 9.71615 0.0943979 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.408757 0.317872

CAGE analysis