Hb_001269_440

Information

Type -
Description -
Location Contig1269: 477119-477424
Sequence    

Annotation

kegg
ID tcc:TCM_033854
description Calcium-binding EF-hand family protein, putative
nr
ID KDP38363.1
description hypothetical protein JCGZ_04288 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KTR6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04288 PE=4 SV=1
Gene Ontology
ID GO:0005622
description calcium-binding ef-hand family

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001269_440 0.0 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
2 Hb_002837_150 0.0794770139 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
3 Hb_000086_160 0.0880146111 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
4 Hb_002025_190 0.0889254324 - - PREDICTED: transcription factor bHLH111 [Jatropha curcas]
5 Hb_005183_020 0.0932764411 - - hypothetical protein JCGZ_04285 [Jatropha curcas]
6 Hb_000025_150 0.1002590768 transcription factor TF Family: HSF hypothetical protein POPTR_0001s28040g [Populus trichocarpa]
7 Hb_003212_030 0.1005086211 - - multidrug resistance pump, putative [Ricinus communis]
8 Hb_001053_100 0.1027643372 - - DNA-damage-inducible protein f, putative [Ricinus communis]
9 Hb_024066_030 0.1034129583 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
10 Hb_006061_020 0.1042543815 transcription factor TF Family: bZIP bZIP family protein [Populus trichocarpa]
11 Hb_001584_250 0.109438824 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
12 Hb_074100_010 0.1120058375 - - hypothetical protein JCGZ_23768 [Jatropha curcas]
13 Hb_001141_010 0.1155976659 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
14 Hb_003090_250 0.1167743429 - - Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein isoform 1 [Theobroma cacao]
15 Hb_000999_060 0.117421239 - - hypothetical protein POPTR_0018s11350g [Populus trichocarpa]
16 Hb_000245_070 0.1180878927 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
17 Hb_103632_010 0.118313156 - - triacylglycerol lipase, putative [Ricinus communis]
18 Hb_007472_060 0.1211036215 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
19 Hb_009851_120 0.1214870396 - - PREDICTED: RING-H2 zinc finger protein RHA4a [Jatropha curcas]
20 Hb_002835_120 0.1214886729 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]

Gene co-expression network

sample Hb_001269_440 Hb_001269_440 Hb_002837_150 Hb_002837_150 Hb_001269_440--Hb_002837_150 Hb_000086_160 Hb_000086_160 Hb_001269_440--Hb_000086_160 Hb_002025_190 Hb_002025_190 Hb_001269_440--Hb_002025_190 Hb_005183_020 Hb_005183_020 Hb_001269_440--Hb_005183_020 Hb_000025_150 Hb_000025_150 Hb_001269_440--Hb_000025_150 Hb_003212_030 Hb_003212_030 Hb_001269_440--Hb_003212_030 Hb_103632_010 Hb_103632_010 Hb_002837_150--Hb_103632_010 Hb_001141_010 Hb_001141_010 Hb_002837_150--Hb_001141_010 Hb_002837_150--Hb_003212_030 Hb_004617_010 Hb_004617_010 Hb_002837_150--Hb_004617_010 Hb_002835_120 Hb_002835_120 Hb_002837_150--Hb_002835_120 Hb_001053_100 Hb_001053_100 Hb_000086_160--Hb_001053_100 Hb_103931_010 Hb_103931_010 Hb_000086_160--Hb_103931_010 Hb_001396_080 Hb_001396_080 Hb_000086_160--Hb_001396_080 Hb_000027_010 Hb_000027_010 Hb_000086_160--Hb_000027_010 Hb_000086_160--Hb_003212_030 Hb_000999_060 Hb_000999_060 Hb_002025_190--Hb_000999_060 Hb_000628_100 Hb_000628_100 Hb_002025_190--Hb_000628_100 Hb_074100_010 Hb_074100_010 Hb_002025_190--Hb_074100_010 Hb_009851_120 Hb_009851_120 Hb_002025_190--Hb_009851_120 Hb_002025_190--Hb_000027_010 Hb_005183_020--Hb_001053_100 Hb_005183_020--Hb_001396_080 Hb_015085_010 Hb_015085_010 Hb_005183_020--Hb_015085_010 Hb_005183_020--Hb_000086_160 Hb_000032_160 Hb_000032_160 Hb_005183_020--Hb_000032_160 Hb_000438_180 Hb_000438_180 Hb_000025_150--Hb_000438_180 Hb_180293_010 Hb_180293_010 Hb_000025_150--Hb_180293_010 Hb_001401_110 Hb_001401_110 Hb_000025_150--Hb_001401_110 Hb_001584_250 Hb_001584_250 Hb_000025_150--Hb_001584_250 Hb_001269_430 Hb_001269_430 Hb_000025_150--Hb_001269_430 Hb_004807_070 Hb_004807_070 Hb_000025_150--Hb_004807_070 Hb_005373_030 Hb_005373_030 Hb_003212_030--Hb_005373_030 Hb_003212_030--Hb_004617_010 Hb_001013_070 Hb_001013_070 Hb_003212_030--Hb_001013_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 11.6729 0.931157 73.0507 0 0.141512
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.778695 2.19013

CAGE analysis