Hb_103632_010

Information

Type -
Description -
Location Contig103632: 624-884
Sequence    

Annotation

kegg
ID rcu:RCOM_0992060
description triacylglycerol lipase, putative
nr
ID XP_002520983.1
description triacylglycerol lipase, putative [Ricinus communis]
swissprot
ID Q941F1
description Phospholipase A1-Igamma1, chloroplastic OS=Arabidopsis thaliana GN=At1g06800 PE=1 SV=2
trembl
ID B9S4S6
description Triacylglycerol lipase, putative OS=Ricinus communis GN=RCOM_0992060 PE=4 SV=1
Gene Ontology
ID GO:0008970
description phospholipase a1- chloroplastic-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_01379: 622-949
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_103632_010 0.0 - - triacylglycerol lipase, putative [Ricinus communis]
2 Hb_002837_150 0.0517196169 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
3 Hb_001141_010 0.0751239142 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
4 Hb_000638_110 0.0897212535 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
5 Hb_001255_030 0.0900224724 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
6 Hb_004757_040 0.098616724 - - -
7 Hb_000007_020 0.1107812399 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
8 Hb_004617_010 0.1124771655 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
9 Hb_002835_120 0.1137011639 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
10 Hb_000349_280 0.1139190362 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000422_060 0.1148591812 transcription factor TF Family: OFP hypothetical protein RCOM_1282480 [Ricinus communis]
12 Hb_001269_440 0.118313156 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
13 Hb_001584_250 0.1208914967 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
14 Hb_006618_100 0.1211792921 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
15 Hb_005736_110 0.1240501836 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
16 Hb_145975_010 0.1256784329 - - cytochrome P450, putative [Ricinus communis]
17 Hb_011314_010 0.1275775234 - - PREDICTED: disease resistance protein RPS6-like isoform X1 [Jatropha curcas]
18 Hb_022597_010 0.131242062 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 13 [Vitis vinifera]
19 Hb_003212_030 0.1315258967 - - multidrug resistance pump, putative [Ricinus communis]
20 Hb_032299_020 0.1326453723 - - tonoplast intrinsic protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_103632_010 Hb_103632_010 Hb_002837_150 Hb_002837_150 Hb_103632_010--Hb_002837_150 Hb_001141_010 Hb_001141_010 Hb_103632_010--Hb_001141_010 Hb_000638_110 Hb_000638_110 Hb_103632_010--Hb_000638_110 Hb_001255_030 Hb_001255_030 Hb_103632_010--Hb_001255_030 Hb_004757_040 Hb_004757_040 Hb_103632_010--Hb_004757_040 Hb_000007_020 Hb_000007_020 Hb_103632_010--Hb_000007_020 Hb_002837_150--Hb_001141_010 Hb_001269_440 Hb_001269_440 Hb_002837_150--Hb_001269_440 Hb_003212_030 Hb_003212_030 Hb_002837_150--Hb_003212_030 Hb_004617_010 Hb_004617_010 Hb_002837_150--Hb_004617_010 Hb_002835_120 Hb_002835_120 Hb_002837_150--Hb_002835_120 Hb_001141_010--Hb_000638_110 Hb_001141_010--Hb_002835_120 Hb_001141_010--Hb_004757_040 Hb_001141_010--Hb_001269_440 Hb_000638_110--Hb_002835_120 Hb_000638_110--Hb_004757_040 Hb_000638_110--Hb_002837_150 Hb_001322_010 Hb_001322_010 Hb_000638_110--Hb_001322_010 Hb_027402_110 Hb_027402_110 Hb_001255_030--Hb_027402_110 Hb_001255_030--Hb_004757_040 Hb_001255_030--Hb_002837_150 Hb_001675_260 Hb_001675_260 Hb_001255_030--Hb_001675_260 Hb_000860_030 Hb_000860_030 Hb_001255_030--Hb_000860_030 Hb_000245_070 Hb_000245_070 Hb_004757_040--Hb_000245_070 Hb_004757_040--Hb_002837_150 Hb_008200_010 Hb_008200_010 Hb_000007_020--Hb_008200_010 Hb_006590_040 Hb_006590_040 Hb_000007_020--Hb_006590_040 Hb_001584_250 Hb_001584_250 Hb_000007_020--Hb_001584_250 Hb_001502_010 Hb_001502_010 Hb_000007_020--Hb_001502_010 Hb_002116_020 Hb_002116_020 Hb_000007_020--Hb_002116_020 Hb_000201_050 Hb_000201_050 Hb_000007_020--Hb_000201_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.97731 0.242982 8.8425 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.406442 0.611321

CAGE analysis