Hb_000007_020

Information

Type transcription factor
Description TF Family: bZIP
Location Contig7: 53975-56471
Sequence    

Annotation

kegg
ID rcu:RCOM_1465160
description Ocs element-binding factor, putative
nr
ID XP_002514552.1
description Ocs element-binding factor, putative [Ricinus communis]
swissprot
ID Q9FMC2
description Basic leucine zipper 43 OS=Arabidopsis thaliana GN=BZIP43 PE=1 SV=1
trembl
ID B9RLD3
description Ocs element-binding factor, putative OS=Ricinus communis GN=RCOM_1465160 PE=4 SV=1
Gene Ontology
ID GO:0003700
description basic leucine zipper 43-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000007_020 0.0 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
2 Hb_008200_010 0.0817541603 - - PREDICTED: ABC transporter G family member 14-like isoform X1 [Jatropha curcas]
3 Hb_006590_040 0.0826309661 - - amino acid permease, putative [Ricinus communis]
4 Hb_001584_250 0.0862746374 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
5 Hb_001502_010 0.0911228495 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
6 Hb_002116_020 0.099770858 - - PREDICTED: probable pectinesterase/pectinesterase inhibitor 35 [Jatropha curcas]
7 Hb_000201_050 0.1032188381 - - -
8 Hb_021443_010 0.1040407751 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]
9 Hb_004125_080 0.104981327 - - PREDICTED: dCTP pyrophosphatase 1-like [Populus euphratica]
10 Hb_027402_110 0.1103210579 - - PREDICTED: uncharacterized protein LOC105640545 [Jatropha curcas]
11 Hb_103632_010 0.1107812399 - - triacylglycerol lipase, putative [Ricinus communis]
12 Hb_024066_030 0.1128204472 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
13 Hb_005695_050 0.1134078379 - - PREDICTED: sulfate transporter 1.3-like [Jatropha curcas]
14 Hb_000245_070 0.1149292909 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
15 Hb_002374_070 0.115392568 - - amino acid transporter, putative [Ricinus communis]
16 Hb_001141_010 0.117903039 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
17 Hb_000007_470 0.1182118829 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
18 Hb_002837_150 0.1184642547 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
19 Hb_004757_040 0.1186471487 - - -
20 Hb_003711_050 0.1220543348 - - Isoflavone reductase, putative [Ricinus communis]

Gene co-expression network

sample Hb_000007_020 Hb_000007_020 Hb_008200_010 Hb_008200_010 Hb_000007_020--Hb_008200_010 Hb_006590_040 Hb_006590_040 Hb_000007_020--Hb_006590_040 Hb_001584_250 Hb_001584_250 Hb_000007_020--Hb_001584_250 Hb_001502_010 Hb_001502_010 Hb_000007_020--Hb_001502_010 Hb_002116_020 Hb_002116_020 Hb_000007_020--Hb_002116_020 Hb_000201_050 Hb_000201_050 Hb_000007_020--Hb_000201_050 Hb_008200_010--Hb_001502_010 Hb_008200_010--Hb_006590_040 Hb_002374_070 Hb_002374_070 Hb_008200_010--Hb_002374_070 Hb_005695_050 Hb_005695_050 Hb_008200_010--Hb_005695_050 Hb_027402_110 Hb_027402_110 Hb_008200_010--Hb_027402_110 Hb_006590_040--Hb_002116_020 Hb_004125_080 Hb_004125_080 Hb_006590_040--Hb_004125_080 Hb_168031_010 Hb_168031_010 Hb_006590_040--Hb_168031_010 Hb_002411_070 Hb_002411_070 Hb_006590_040--Hb_002411_070 Hb_006590_040--Hb_002374_070 Hb_032299_020 Hb_032299_020 Hb_001584_250--Hb_032299_020 Hb_000429_080 Hb_000429_080 Hb_001584_250--Hb_000429_080 Hb_000438_180 Hb_000438_180 Hb_001584_250--Hb_000438_180 Hb_001584_250--Hb_000201_050 Hb_009851_120 Hb_009851_120 Hb_001584_250--Hb_009851_120 Hb_001502_010--Hb_027402_110 Hb_001502_010--Hb_000201_050 Hb_001502_010--Hb_001584_250 Hb_001502_010--Hb_000429_080 Hb_002116_020--Hb_168031_010 Hb_002116_020--Hb_004125_080 Hb_005054_010 Hb_005054_010 Hb_002116_020--Hb_005054_010 Hb_002116_020--Hb_002411_070 Hb_000373_110 Hb_000373_110 Hb_002116_020--Hb_000373_110 Hb_003711_050 Hb_003711_050 Hb_000201_050--Hb_003711_050 Hb_032260_040 Hb_032260_040 Hb_000201_050--Hb_032260_040 Hb_027746_030 Hb_027746_030 Hb_000201_050--Hb_027746_030 Hb_000422_060 Hb_000422_060 Hb_000201_050--Hb_000422_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.42339 0.190529 7.83153 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.050922 0.495988

CAGE analysis