Hb_001141_010

Information

Type -
Description -
Location Contig1141: 10870-15431
Sequence    

Annotation

kegg
ID pop:POPTR_0010s09280g
description POPTRDRAFT_804996; hypothetical protein
nr
ID XP_012069690.1
description PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
swissprot
ID Q9SV13
description Sulfate transporter 3.1 OS=Arabidopsis thaliana GN=SULTR3;1 PE=2 SV=1
trembl
ID A0A067KZ67
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02221 PE=4 SV=1
Gene Ontology
ID GO:0009507
description sulfate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_04224: 13825-15438
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001141_010 0.0 - - PREDICTED: sulfate transporter 3.1-like [Jatropha curcas]
2 Hb_002837_150 0.0747390158 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
3 Hb_103632_010 0.0751239142 - - triacylglycerol lipase, putative [Ricinus communis]
4 Hb_000638_110 0.0891668716 transcription factor TF Family: NAC hypothetical protein POPTR_0007s04250g [Populus trichocarpa]
5 Hb_002835_120 0.0992207769 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
6 Hb_004757_040 0.1041754552 - - -
7 Hb_001269_440 0.1155976659 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
8 Hb_000007_020 0.117903039 transcription factor TF Family: bZIP Ocs element-binding factor, putative [Ricinus communis]
9 Hb_000245_070 0.1312688676 - - PREDICTED: uncharacterized protein LOC105141276 [Populus euphratica]
10 Hb_145975_010 0.1354706732 - - cytochrome P450, putative [Ricinus communis]
11 Hb_005736_110 0.1380070987 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
12 Hb_024066_030 0.1407537818 - - PREDICTED: beta-glucosidase 24-like [Jatropha curcas]
13 Hb_004617_010 0.1407955668 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
14 Hb_003212_030 0.1413325531 - - multidrug resistance pump, putative [Ricinus communis]
15 Hb_000349_280 0.1421674048 - - conserved hypothetical protein [Ricinus communis]
16 Hb_001255_030 0.1422691972 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
17 Hb_004374_040 0.1476430333 - - PREDICTED: beta-carotene 3-hydroxylase, chloroplastic-like [Jatropha curcas]
18 Hb_001584_250 0.1483200804 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
19 Hb_006618_100 0.1501346283 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
20 Hb_021443_010 0.1549816246 - - PREDICTED: cleavage and polyadenylation specificity factor subunit 1 [Jatropha curcas]

Gene co-expression network

sample Hb_001141_010 Hb_001141_010 Hb_002837_150 Hb_002837_150 Hb_001141_010--Hb_002837_150 Hb_103632_010 Hb_103632_010 Hb_001141_010--Hb_103632_010 Hb_000638_110 Hb_000638_110 Hb_001141_010--Hb_000638_110 Hb_002835_120 Hb_002835_120 Hb_001141_010--Hb_002835_120 Hb_004757_040 Hb_004757_040 Hb_001141_010--Hb_004757_040 Hb_001269_440 Hb_001269_440 Hb_001141_010--Hb_001269_440 Hb_002837_150--Hb_103632_010 Hb_002837_150--Hb_001269_440 Hb_003212_030 Hb_003212_030 Hb_002837_150--Hb_003212_030 Hb_004617_010 Hb_004617_010 Hb_002837_150--Hb_004617_010 Hb_002837_150--Hb_002835_120 Hb_103632_010--Hb_000638_110 Hb_001255_030 Hb_001255_030 Hb_103632_010--Hb_001255_030 Hb_103632_010--Hb_004757_040 Hb_000007_020 Hb_000007_020 Hb_103632_010--Hb_000007_020 Hb_000638_110--Hb_002835_120 Hb_000638_110--Hb_004757_040 Hb_000638_110--Hb_002837_150 Hb_001322_010 Hb_001322_010 Hb_000638_110--Hb_001322_010 Hb_005736_110 Hb_005736_110 Hb_002835_120--Hb_005736_110 Hb_145975_010 Hb_145975_010 Hb_002835_120--Hb_145975_010 Hb_000349_280 Hb_000349_280 Hb_002835_120--Hb_000349_280 Hb_004757_040--Hb_001255_030 Hb_000245_070 Hb_000245_070 Hb_004757_040--Hb_000245_070 Hb_004757_040--Hb_002837_150 Hb_000086_160 Hb_000086_160 Hb_001269_440--Hb_000086_160 Hb_002025_190 Hb_002025_190 Hb_001269_440--Hb_002025_190 Hb_005183_020 Hb_005183_020 Hb_001269_440--Hb_005183_020 Hb_000025_150 Hb_000025_150 Hb_001269_440--Hb_000025_150 Hb_001269_440--Hb_003212_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.011024 7.64391 0.148651 32.762 0 0.00846274
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0202038 0.0158975 0 1.28909 2.22361

CAGE analysis