Hb_145975_010

Information

Type -
Description -
Location Contig145975: 92-456
Sequence    

Annotation

kegg
ID rcu:RCOM_0841220
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002528647.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID P37122
description Cytochrome P450 76A2 OS=Solanum melongena GN=CYP76A2 PE=2 SV=1
trembl
ID B9SRM8
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0841220 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 76a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_145975_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_006618_100 0.0685252276 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
3 Hb_004757_010 0.0819144621 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
4 Hb_001343_060 0.0863068913 - - Cytochrome P450 [Theobroma cacao]
5 Hb_027411_030 0.0915642642 - - metal ion binding protein, putative [Ricinus communis]
6 Hb_001141_430 0.0930461743 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
7 Hb_001269_430 0.0990199275 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
8 Hb_010217_020 0.0991989591 - - cinnamate 4-hydroxylase [Leucaena leucocephala]
9 Hb_011344_050 0.0999578454 - - PREDICTED: 21 kDa protein [Jatropha curcas]
10 Hb_004158_040 0.1014164367 - - PREDICTED: WAT1-related protein At2g37460-like [Jatropha curcas]
11 Hb_000291_240 0.1019375023 - - hypothetical protein POPTR_0005s16430g [Populus trichocarpa]
12 Hb_001454_350 0.1031721621 - - PREDICTED: uncharacterized protein LOC105643449 [Jatropha curcas]
13 Hb_002837_150 0.1060768155 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
14 Hb_002835_120 0.1067067946 - - PREDICTED: uncharacterized protein LOC105640304 [Jatropha curcas]
15 Hb_005736_110 0.107186353 transcription factor TF Family: MYB MYB transcriptional factor [Populus tremula x Populus tremuloides]
16 Hb_004617_010 0.10790625 - - PREDICTED: protein TRANSPARENT TESTA 12-like isoform X3 [Citrus sinensis]
17 Hb_001579_160 0.1086028764 - - PREDICTED: kininogen-1-like [Jatropha curcas]
18 Hb_159791_010 0.1131286698 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
19 Hb_000243_240 0.1138783766 - - cytochrome P450 family protein [Populus trichocarpa]
20 Hb_000349_280 0.1157221918 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_145975_010 Hb_145975_010 Hb_006618_100 Hb_006618_100 Hb_145975_010--Hb_006618_100 Hb_004757_010 Hb_004757_010 Hb_145975_010--Hb_004757_010 Hb_001343_060 Hb_001343_060 Hb_145975_010--Hb_001343_060 Hb_027411_030 Hb_027411_030 Hb_145975_010--Hb_027411_030 Hb_001141_430 Hb_001141_430 Hb_145975_010--Hb_001141_430 Hb_001269_430 Hb_001269_430 Hb_145975_010--Hb_001269_430 Hb_010217_020 Hb_010217_020 Hb_006618_100--Hb_010217_020 Hb_000349_280 Hb_000349_280 Hb_006618_100--Hb_000349_280 Hb_006618_100--Hb_004757_010 Hb_004158_040 Hb_004158_040 Hb_006618_100--Hb_004158_040 Hb_001579_160 Hb_001579_160 Hb_006618_100--Hb_001579_160 Hb_159791_010 Hb_159791_010 Hb_004757_010--Hb_159791_010 Hb_004757_010--Hb_001343_060 Hb_004757_010--Hb_001141_430 Hb_011344_050 Hb_011344_050 Hb_004757_010--Hb_011344_050 Hb_004757_010--Hb_027411_030 Hb_001712_010 Hb_001712_010 Hb_004757_010--Hb_001712_010 Hb_001343_060--Hb_001141_430 Hb_001343_060--Hb_159791_010 Hb_011344_110 Hb_011344_110 Hb_001343_060--Hb_011344_110 Hb_001343_060--Hb_001269_430 Hb_000816_170 Hb_000816_170 Hb_001343_060--Hb_000816_170 Hb_027411_030--Hb_011344_050 Hb_027411_030--Hb_001579_160 Hb_000991_060 Hb_000991_060 Hb_027411_030--Hb_000991_060 Hb_027411_030--Hb_001141_430 Hb_001141_430--Hb_159791_010 Hb_001141_430--Hb_011344_110 Hb_001141_430--Hb_000816_170 Hb_001141_430--Hb_001712_010 Hb_004807_070 Hb_004807_070 Hb_001269_430--Hb_004807_070 Hb_001401_110 Hb_001401_110 Hb_001269_430--Hb_001401_110 Hb_000438_180 Hb_000438_180 Hb_001269_430--Hb_000438_180 Hb_011930_090 Hb_011930_090 Hb_001269_430--Hb_011930_090 Hb_001269_430--Hb_011344_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 28.666 4.17966 241.199 0 0.55297
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.28405 0 0 7.12712 30.416

CAGE analysis