Hb_001343_060

Information

Type -
Description -
Location Contig1343: 71659-73556
Sequence    

Annotation

kegg
ID tcc:TCM_042318
description Cytochrome P450
nr
ID XP_007017115.1
description Cytochrome P450 [Theobroma cacao]
swissprot
ID Q2QYH7
description Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica GN=CYP714C2 PE=2 SV=1
trembl
ID A0A061H0G3
description Cytochrome P450 OS=Theobroma cacao GN=TCM_042318 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 714c2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001343_060 0.0 - - Cytochrome P450 [Theobroma cacao]
2 Hb_001141_430 0.0447586072 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
3 Hb_159791_010 0.0598403307 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
4 Hb_004757_010 0.0602071161 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
5 Hb_011344_110 0.0629422137 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
6 Hb_001269_430 0.0640897602 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
7 Hb_000816_170 0.0693132653 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 15 [Jatropha curcas]
8 Hb_001712_010 0.0725622352 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
9 Hb_004807_070 0.0747511355 - - hypothetical protein POPTR_0004s17330g, partial [Populus trichocarpa]
10 Hb_000243_240 0.0757901411 - - cytochrome P450 family protein [Populus trichocarpa]
11 Hb_000244_290 0.0793199305 - - PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Jatropha curcas]
12 Hb_001232_170 0.0814347737 - - sulfate transporter, putative [Ricinus communis]
13 Hb_145975_010 0.0863068913 - - cytochrome P450, putative [Ricinus communis]
14 Hb_000628_070 0.086590943 - - -
15 Hb_001401_110 0.0908786051 - - hypothetical protein JCGZ_04272 [Jatropha curcas]
16 Hb_001157_120 0.0913048092 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
17 Hb_000358_070 0.0946854246 - - hypothetical protein POPTR_0003s01410g [Populus trichocarpa]
18 Hb_027411_030 0.0971547194 - - metal ion binding protein, putative [Ricinus communis]
19 Hb_000959_170 0.0973386901 - - Cell division protein kinase 7, putative [Ricinus communis]
20 Hb_014881_020 0.0978016815 - - Protein P21, putative [Ricinus communis]

Gene co-expression network

sample Hb_001343_060 Hb_001343_060 Hb_001141_430 Hb_001141_430 Hb_001343_060--Hb_001141_430 Hb_159791_010 Hb_159791_010 Hb_001343_060--Hb_159791_010 Hb_004757_010 Hb_004757_010 Hb_001343_060--Hb_004757_010 Hb_011344_110 Hb_011344_110 Hb_001343_060--Hb_011344_110 Hb_001269_430 Hb_001269_430 Hb_001343_060--Hb_001269_430 Hb_000816_170 Hb_000816_170 Hb_001343_060--Hb_000816_170 Hb_001141_430--Hb_159791_010 Hb_001141_430--Hb_004757_010 Hb_001141_430--Hb_011344_110 Hb_001141_430--Hb_000816_170 Hb_001712_010 Hb_001712_010 Hb_001141_430--Hb_001712_010 Hb_159791_010--Hb_004757_010 Hb_000959_170 Hb_000959_170 Hb_159791_010--Hb_000959_170 Hb_159791_010--Hb_000816_170 Hb_000087_160 Hb_000087_160 Hb_159791_010--Hb_000087_160 Hb_011344_050 Hb_011344_050 Hb_004757_010--Hb_011344_050 Hb_027411_030 Hb_027411_030 Hb_004757_010--Hb_027411_030 Hb_004757_010--Hb_001712_010 Hb_000244_290 Hb_000244_290 Hb_011344_110--Hb_000244_290 Hb_000628_070 Hb_000628_070 Hb_011344_110--Hb_000628_070 Hb_014881_020 Hb_014881_020 Hb_011344_110--Hb_014881_020 Hb_001232_170 Hb_001232_170 Hb_011344_110--Hb_001232_170 Hb_006018_020 Hb_006018_020 Hb_011344_110--Hb_006018_020 Hb_004807_070 Hb_004807_070 Hb_001269_430--Hb_004807_070 Hb_001401_110 Hb_001401_110 Hb_001269_430--Hb_001401_110 Hb_000438_180 Hb_000438_180 Hb_001269_430--Hb_000438_180 Hb_011930_090 Hb_011930_090 Hb_001269_430--Hb_011930_090 Hb_001269_430--Hb_011344_110 Hb_000358_070 Hb_000358_070 Hb_000816_170--Hb_000358_070 Hb_000012_340 Hb_000012_340 Hb_000816_170--Hb_000012_340 Hb_000816_170--Hb_001232_170 Hb_000243_240 Hb_000243_240 Hb_000816_170--Hb_000243_240 Hb_000201_060 Hb_000201_060 Hb_000816_170--Hb_000201_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.736116 0.200005 9.0192 0.0132502 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0945455 0.843841

CAGE analysis