Hb_001712_010

Information

Type -
Description -
Location Contig1712: 34465-39711
Sequence    

Annotation

kegg
ID pop:POPTR_0243s00200g
description hypothetical protein
nr
ID XP_012081998.1
description PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
swissprot
ID Q93ZF5
description Phosphate transporter PHO1 homolog 1 OS=Arabidopsis thaliana GN=PHO1-H1 PE=2 SV=1
trembl
ID A0A067KAQ0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18256 PE=4 SV=1
Gene Ontology
ID GO:0016021
description phosphate transporter pho1 homolog 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_16003: 35736-36745 , PASA_asmbl_16004: 37506-38289 , PASA_asmbl_16005: 38781-39856
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001712_010 0.0 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
2 Hb_092272_010 0.0653927694 - - -
3 Hb_000628_070 0.0674328925 - - -
4 Hb_001343_060 0.0725622352 - - Cytochrome P450 [Theobroma cacao]
5 Hb_001141_430 0.0739123671 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
6 Hb_011344_110 0.077275603 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
7 Hb_004757_010 0.0782099551 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
8 Hb_000521_060 0.0786070711 - - PREDICTED: protein YLS3-like [Jatropha curcas]
9 Hb_118934_010 0.0788708741 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
10 Hb_001401_110 0.0800336028 - - hypothetical protein JCGZ_04272 [Jatropha curcas]
11 Hb_000244_290 0.0806047044 - - PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 [Jatropha curcas]
12 Hb_004807_070 0.0818397756 - - hypothetical protein POPTR_0004s17330g, partial [Populus trichocarpa]
13 Hb_001269_430 0.0826017829 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
14 Hb_004158_040 0.0872458126 - - PREDICTED: WAT1-related protein At2g37460-like [Jatropha curcas]
15 Hb_000816_090 0.0873685564 transcription factor TF Family: TRAF protein binding protein, putative [Ricinus communis]
16 Hb_001579_160 0.0878885236 - - PREDICTED: kininogen-1-like [Jatropha curcas]
17 Hb_001232_170 0.0896482449 - - sulfate transporter, putative [Ricinus communis]
18 Hb_000087_160 0.0919839847 - - ABC transporter family protein [Hevea brasiliensis]
19 Hb_000327_350 0.0941546493 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
20 Hb_027411_030 0.0949005384 - - metal ion binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_001712_010 Hb_001712_010 Hb_092272_010 Hb_092272_010 Hb_001712_010--Hb_092272_010 Hb_000628_070 Hb_000628_070 Hb_001712_010--Hb_000628_070 Hb_001343_060 Hb_001343_060 Hb_001712_010--Hb_001343_060 Hb_001141_430 Hb_001141_430 Hb_001712_010--Hb_001141_430 Hb_011344_110 Hb_011344_110 Hb_001712_010--Hb_011344_110 Hb_004757_010 Hb_004757_010 Hb_001712_010--Hb_004757_010 Hb_118934_010 Hb_118934_010 Hb_092272_010--Hb_118934_010 Hb_001401_110 Hb_001401_110 Hb_092272_010--Hb_001401_110 Hb_001579_160 Hb_001579_160 Hb_092272_010--Hb_001579_160 Hb_025557_090 Hb_025557_090 Hb_092272_010--Hb_025557_090 Hb_000521_060 Hb_000521_060 Hb_092272_010--Hb_000521_060 Hb_001232_170 Hb_001232_170 Hb_000628_070--Hb_001232_170 Hb_000244_290 Hb_000244_290 Hb_000628_070--Hb_000244_290 Hb_000628_070--Hb_011344_110 Hb_006018_020 Hb_006018_020 Hb_000628_070--Hb_006018_020 Hb_005396_020 Hb_005396_020 Hb_000628_070--Hb_005396_020 Hb_001343_060--Hb_001141_430 Hb_159791_010 Hb_159791_010 Hb_001343_060--Hb_159791_010 Hb_001343_060--Hb_004757_010 Hb_001343_060--Hb_011344_110 Hb_001269_430 Hb_001269_430 Hb_001343_060--Hb_001269_430 Hb_000816_170 Hb_000816_170 Hb_001343_060--Hb_000816_170 Hb_001141_430--Hb_159791_010 Hb_001141_430--Hb_004757_010 Hb_001141_430--Hb_011344_110 Hb_001141_430--Hb_000816_170 Hb_011344_110--Hb_000244_290 Hb_014881_020 Hb_014881_020 Hb_011344_110--Hb_014881_020 Hb_011344_110--Hb_001232_170 Hb_011344_110--Hb_006018_020 Hb_004757_010--Hb_159791_010 Hb_011344_050 Hb_011344_050 Hb_004757_010--Hb_011344_050 Hb_027411_030 Hb_027411_030 Hb_004757_010--Hb_027411_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.673777 0.405172 9.24673 0.0080045 0.00698999
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0283608 1.18323

CAGE analysis