Hb_118934_010

Information

Type -
Description -
Location Contig118934: 163-426
Sequence    

Annotation

kegg
ID rcu:RCOM_0410720
description UDP-glucosyltransferase, putative (EC:2.4.1.115)
nr
ID XP_012081690.1
description PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
swissprot
ID Q66PF2
description Putative UDP-rhamnose:rhamnosyltransferase 1 OS=Fragaria ananassa GN=GT4 PE=2 SV=1
trembl
ID A0A067K0Q8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18726 PE=4 SV=1
Gene Ontology
ID GO:0047213
description udp-rhamnose:rhamnosyltransferase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_118934_010 0.0 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Jatropha curcas]
2 Hb_000521_060 0.0562256122 - - PREDICTED: protein YLS3-like [Jatropha curcas]
3 Hb_009158_010 0.0712914574 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
4 Hb_006573_120 0.0732715222 - - PREDICTED: DUF21 domain-containing protein At5g52790 [Jatropha curcas]
5 Hb_092272_010 0.0735554659 - - -
6 Hb_001712_010 0.0788708741 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
7 Hb_000497_030 0.080698557 - - -
8 Hb_006816_060 0.0823118121 - - PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]
9 Hb_000318_500 0.0847125596 - - conserved hypothetical protein [Ricinus communis]
10 Hb_022250_140 0.0865434905 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
11 Hb_003598_050 0.0865696859 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
12 Hb_025557_090 0.0907715954 - - hypothetical protein glysoja_034865 [Glycine soja]
13 Hb_000816_090 0.0920464798 transcription factor TF Family: TRAF protein binding protein, putative [Ricinus communis]
14 Hb_112950_010 0.0923723961 - - hypothetical protein JCGZ_00277 [Jatropha curcas]
15 Hb_071079_040 0.0958220573 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
16 Hb_001349_040 0.099645432 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
17 Hb_001433_230 0.100842937 - - PREDICTED: kinesin-4-like [Jatropha curcas]
18 Hb_006570_170 0.1014968928 - - Gibberellin-regulated protein 1 precursor, putative [Ricinus communis]
19 Hb_000327_350 0.1016417956 - - PREDICTED: 3-ketoacyl-CoA synthase 21-like [Jatropha curcas]
20 Hb_003060_020 0.1049263594 - - serine carboxypeptidase, putative [Ricinus communis]

Gene co-expression network

sample Hb_118934_010 Hb_118934_010 Hb_000521_060 Hb_000521_060 Hb_118934_010--Hb_000521_060 Hb_009158_010 Hb_009158_010 Hb_118934_010--Hb_009158_010 Hb_006573_120 Hb_006573_120 Hb_118934_010--Hb_006573_120 Hb_092272_010 Hb_092272_010 Hb_118934_010--Hb_092272_010 Hb_001712_010 Hb_001712_010 Hb_118934_010--Hb_001712_010 Hb_000497_030 Hb_000497_030 Hb_118934_010--Hb_000497_030 Hb_006816_060 Hb_006816_060 Hb_000521_060--Hb_006816_060 Hb_000521_060--Hb_001712_010 Hb_022250_140 Hb_022250_140 Hb_000521_060--Hb_022250_140 Hb_001433_230 Hb_001433_230 Hb_000521_060--Hb_001433_230 Hb_003598_050 Hb_003598_050 Hb_000521_060--Hb_003598_050 Hb_009158_010--Hb_006573_120 Hb_025557_090 Hb_025557_090 Hb_009158_010--Hb_025557_090 Hb_116349_080 Hb_116349_080 Hb_009158_010--Hb_116349_080 Hb_009158_010--Hb_022250_140 Hb_000155_030 Hb_000155_030 Hb_009158_010--Hb_000155_030 Hb_000310_050 Hb_000310_050 Hb_006573_120--Hb_000310_050 Hb_112950_010 Hb_112950_010 Hb_006573_120--Hb_112950_010 Hb_001349_040 Hb_001349_040 Hb_006573_120--Hb_001349_040 Hb_002686_220 Hb_002686_220 Hb_006573_120--Hb_002686_220 Hb_092272_010--Hb_001712_010 Hb_001401_110 Hb_001401_110 Hb_092272_010--Hb_001401_110 Hb_001579_160 Hb_001579_160 Hb_092272_010--Hb_001579_160 Hb_092272_010--Hb_025557_090 Hb_092272_010--Hb_000521_060 Hb_000628_070 Hb_000628_070 Hb_001712_010--Hb_000628_070 Hb_001343_060 Hb_001343_060 Hb_001712_010--Hb_001343_060 Hb_001141_430 Hb_001141_430 Hb_001712_010--Hb_001141_430 Hb_011344_110 Hb_011344_110 Hb_001712_010--Hb_011344_110 Hb_004757_010 Hb_004757_010 Hb_001712_010--Hb_004757_010 Hb_000699_220 Hb_000699_220 Hb_000497_030--Hb_000699_220 Hb_006717_060 Hb_006717_060 Hb_000497_030--Hb_006717_060 Hb_003580_020 Hb_003580_020 Hb_000497_030--Hb_003580_020 Hb_071079_040 Hb_071079_040 Hb_000497_030--Hb_071079_040 Hb_000497_030--Hb_001349_040 Hb_000083_200 Hb_000083_200 Hb_000497_030--Hb_000083_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 11.9575 21.8436 271.408 0.712901 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.392405 39.9061

CAGE analysis