Hb_006717_060

Information

Type -
Description -
Location Contig6717: 39236-41094
Sequence    

Annotation

kegg
ID pop:POPTR_0004s01510g
description POPTRDRAFT_647567; Peroxidase 42 precursor family protein
nr
ID XP_012091347.1
description PREDICTED: peroxidase 42 [Jatropha curcas]
swissprot
ID Q9SB81
description Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2
trembl
ID A0A067JMN0
description Peroxidase OS=Jatropha curcas GN=JCGZ_21220 PE=3 SV=1
Gene Ontology
ID GO:0005623
description peroxidase 42

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006717_060 0.0 - - PREDICTED: peroxidase 42 [Jatropha curcas]
2 Hb_000699_220 0.0526298688 - - PREDICTED: phospholipid-metabolizing enzyme A-C1-like [Jatropha curcas]
3 Hb_000497_030 0.0582760281 - - -
4 Hb_003580_020 0.0584711988 - - conserved hypothetical protein [Ricinus communis]
5 Hb_012114_090 0.0695880636 - - tubulin beta chain, putative [Ricinus communis]
6 Hb_001349_040 0.0706100869 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
7 Hb_000336_120 0.0717306351 - - PREDICTED: mavicyanin [Populus euphratica]
8 Hb_000083_200 0.0756367597 - - conserved hypothetical protein [Ricinus communis]
9 Hb_071079_040 0.0776939161 - - PREDICTED: bidirectional sugar transporter SWEET3 [Jatropha curcas]
10 Hb_001369_480 0.0790861921 transcription factor TF Family: NAC hypothetical protein POPTR_0012s14660g [Populus trichocarpa]
11 Hb_002014_130 0.079773712 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000310_050 0.0823668212 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
13 Hb_001104_060 0.0824261025 - - PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Jatropha curcas]
14 Hb_006153_140 0.0827792237 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
15 Hb_001456_030 0.0834213632 - - PREDICTED: bifunctional pinoresinol-lariciresinol reductase 2 [Vitis vinifera]
16 Hb_005616_020 0.0839850605 - - kinase, putative [Ricinus communis]
17 Hb_000531_030 0.0845432247 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000462_120 0.0851295156 transcription factor TF Family: PLATZ PREDICTED: uncharacterized protein LOC105642310 [Jatropha curcas]
19 Hb_015175_070 0.0920223082 - - cysteine protease, putative [Ricinus communis]
20 Hb_001269_180 0.0936886808 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_006717_060 Hb_006717_060 Hb_000699_220 Hb_000699_220 Hb_006717_060--Hb_000699_220 Hb_000497_030 Hb_000497_030 Hb_006717_060--Hb_000497_030 Hb_003580_020 Hb_003580_020 Hb_006717_060--Hb_003580_020 Hb_012114_090 Hb_012114_090 Hb_006717_060--Hb_012114_090 Hb_001349_040 Hb_001349_040 Hb_006717_060--Hb_001349_040 Hb_000336_120 Hb_000336_120 Hb_006717_060--Hb_000336_120 Hb_000699_220--Hb_012114_090 Hb_000699_220--Hb_000497_030 Hb_000699_220--Hb_001349_040 Hb_000699_220--Hb_000336_120 Hb_005616_020 Hb_005616_020 Hb_000699_220--Hb_005616_020 Hb_000497_030--Hb_003580_020 Hb_071079_040 Hb_071079_040 Hb_000497_030--Hb_071079_040 Hb_000497_030--Hb_001349_040 Hb_000083_200 Hb_000083_200 Hb_000497_030--Hb_000083_200 Hb_005291_020 Hb_005291_020 Hb_003580_020--Hb_005291_020 Hb_000462_120 Hb_000462_120 Hb_003580_020--Hb_000462_120 Hb_003580_020--Hb_000699_220 Hb_002014_130 Hb_002014_130 Hb_003580_020--Hb_002014_130 Hb_012114_090--Hb_000336_120 Hb_001369_480 Hb_001369_480 Hb_012114_090--Hb_001369_480 Hb_000310_050 Hb_000310_050 Hb_012114_090--Hb_000310_050 Hb_001456_030 Hb_001456_030 Hb_012114_090--Hb_001456_030 Hb_001349_040--Hb_000083_200 Hb_112950_010 Hb_112950_010 Hb_001349_040--Hb_112950_010 Hb_001349_040--Hb_000310_050 Hb_015175_070 Hb_015175_070 Hb_000336_120--Hb_015175_070 Hb_000336_120--Hb_000310_050 Hb_000336_120--Hb_001369_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.04714 63.8419 276.56 2094.13 1.51191 1.73897
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0600002 0 26.8226 547.027

CAGE analysis