Hb_002686_220

Information

Type -
Description -
Location Contig2686: 145135-146251
Sequence    

Annotation

kegg
ID rcu:RCOM_1122060
description Alpha-expansin 15 precursor, putative
nr
ID XP_012092696.1
description PREDICTED: expansin-A15-like [Jatropha curcas]
swissprot
ID O80622
description Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2
trembl
ID A0A067J950
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06862 PE=3 SV=1
Gene Ontology
ID GO:0005576
description expansin-a15-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_28029: 145029-146217
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002686_220 0.0 - - PREDICTED: expansin-A15-like [Jatropha curcas]
2 Hb_112950_010 0.0668060721 - - hypothetical protein JCGZ_00277 [Jatropha curcas]
3 Hb_006153_140 0.068239064 - - PREDICTED: adenine phosphoribosyltransferase 3 [Jatropha curcas]
4 Hb_003598_050 0.0750907283 - - Receptor protein kinase CLAVATA1 precursor, putative [Ricinus communis]
5 Hb_009079_020 0.0756461928 - - PREDICTED: protein WALLS ARE THIN 1 [Jatropha curcas]
6 Hb_006573_120 0.0759039852 - - PREDICTED: DUF21 domain-containing protein At5g52790 [Jatropha curcas]
7 Hb_015175_070 0.0776195485 - - cysteine protease, putative [Ricinus communis]
8 Hb_051212_020 0.081139594 - - PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Jatropha curcas]
9 Hb_002309_020 0.0824108375 - - hypothetical protein JCGZ_26057 [Jatropha curcas]
10 Hb_000310_050 0.0827105623 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
11 Hb_003680_240 0.0831797171 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Jatropha curcas]
12 Hb_001818_010 0.0859338883 - - Disease resistance response protein, putative [Ricinus communis]
13 Hb_002092_060 0.0902050191 - - conserved hypothetical protein [Ricinus communis]
14 Hb_000317_380 0.0907454064 - - Peroxidase 47 precursor, putative [Ricinus communis]
15 Hb_001349_040 0.0919014535 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Populus euphratica]
16 Hb_001496_150 0.0958586833 - - PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Jatropha curcas]
17 Hb_009158_010 0.0967450191 - - PREDICTED: cytochrome P450 78A9 [Jatropha curcas]
18 Hb_003197_050 0.0986013867 - - hypothetical protein JCGZ_04279 [Jatropha curcas]
19 Hb_000155_030 0.0997556224 - - PREDICTED: uncharacterized protein LOC105649591 [Jatropha curcas]
20 Hb_000083_200 0.1027329718 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_002686_220 Hb_002686_220 Hb_112950_010 Hb_112950_010 Hb_002686_220--Hb_112950_010 Hb_006153_140 Hb_006153_140 Hb_002686_220--Hb_006153_140 Hb_003598_050 Hb_003598_050 Hb_002686_220--Hb_003598_050 Hb_009079_020 Hb_009079_020 Hb_002686_220--Hb_009079_020 Hb_006573_120 Hb_006573_120 Hb_002686_220--Hb_006573_120 Hb_015175_070 Hb_015175_070 Hb_002686_220--Hb_015175_070 Hb_112950_010--Hb_003598_050 Hb_000083_200 Hb_000083_200 Hb_112950_010--Hb_000083_200 Hb_001500_020 Hb_001500_020 Hb_112950_010--Hb_001500_020 Hb_001349_040 Hb_001349_040 Hb_112950_010--Hb_001349_040 Hb_180088_010 Hb_180088_010 Hb_112950_010--Hb_180088_010 Hb_006153_140--Hb_009079_020 Hb_001818_010 Hb_001818_010 Hb_006153_140--Hb_001818_010 Hb_006153_140--Hb_112950_010 Hb_000866_130 Hb_000866_130 Hb_006153_140--Hb_000866_130 Hb_006153_140--Hb_015175_070 Hb_003598_050--Hb_001500_020 Hb_006351_050 Hb_006351_050 Hb_003598_050--Hb_006351_050 Hb_000497_080 Hb_000497_080 Hb_003598_050--Hb_000497_080 Hb_003598_050--Hb_180088_010 Hb_002260_140 Hb_002260_140 Hb_009079_020--Hb_002260_140 Hb_009079_020--Hb_001818_010 Hb_000724_060 Hb_000724_060 Hb_009079_020--Hb_000724_060 Hb_009079_020--Hb_112950_010 Hb_009158_010 Hb_009158_010 Hb_006573_120--Hb_009158_010 Hb_000310_050 Hb_000310_050 Hb_006573_120--Hb_000310_050 Hb_006573_120--Hb_112950_010 Hb_118934_010 Hb_118934_010 Hb_006573_120--Hb_118934_010 Hb_006573_120--Hb_001349_040 Hb_002092_060 Hb_002092_060 Hb_015175_070--Hb_002092_060 Hb_000336_120 Hb_000336_120 Hb_015175_070--Hb_000336_120 Hb_015175_070--Hb_000310_050 Hb_002309_020 Hb_002309_020 Hb_015175_070--Hb_002309_020 Hb_005295_030 Hb_005295_030 Hb_015175_070--Hb_005295_030 Hb_015175_070--Hb_001349_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0270819 1.12212 5.06708 26.3221 0 0.0636907
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0489297 0 0.0988231 4.34722

CAGE analysis