Hb_159791_010

Information

Type -
Description -
Location Contig159791: 2-457
Sequence    

Annotation

kegg
ID tcc:TCM_000258
description Ferulic acid 5-hydroxylase 1
nr
ID XP_012065254.1
description PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
swissprot
ID Q42600
description Cytochrome P450 84A1 OS=Arabidopsis thaliana GN=CYP84A1 PE=1 SV=1
trembl
ID A0A067LE42
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06475 PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 84a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14235: 1-737
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_159791_010 0.0 - - PREDICTED: cytochrome P450 84A1 [Jatropha curcas]
2 Hb_001141_430 0.0549166616 - - hypothetical protein POPTR_0008s15160g [Populus trichocarpa]
3 Hb_004757_010 0.0598248685 - - PREDICTED: uncharacterized protein LOC105121200 [Populus euphratica]
4 Hb_001343_060 0.0598403307 - - Cytochrome P450 [Theobroma cacao]
5 Hb_000959_170 0.0656804082 - - Cell division protein kinase 7, putative [Ricinus communis]
6 Hb_000816_170 0.0765488126 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 15 [Jatropha curcas]
7 Hb_000087_160 0.0766154128 - - ABC transporter family protein [Hevea brasiliensis]
8 Hb_001232_170 0.0779888508 - - sulfate transporter, putative [Ricinus communis]
9 Hb_001157_120 0.0840655266 - - PREDICTED: dirigent protein 19-like [Jatropha curcas]
10 Hb_000243_240 0.086846259 - - cytochrome P450 family protein [Populus trichocarpa]
11 Hb_000628_070 0.0899830614 - - -
12 Hb_011344_110 0.0909541194 transcription factor TF Family: MYB PREDICTED: protein ODORANT1 [Jatropha curcas]
13 Hb_001269_430 0.0919092431 - - hypothetical protein JCGZ_04286 [Jatropha curcas]
14 Hb_004807_070 0.0925991842 - - hypothetical protein POPTR_0004s17330g, partial [Populus trichocarpa]
15 Hb_000754_010 0.0941835904 - - unnamed protein product [Vitis vinifera]
16 Hb_001712_010 0.0951858932 - - PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
17 Hb_011930_090 0.0961777148 - - PREDICTED: thioredoxin H7-like [Jatropha curcas]
18 Hb_006018_020 0.099200814 - - conserved hypothetical protein [Ricinus communis]
19 Hb_027411_030 0.0999206922 - - metal ion binding protein, putative [Ricinus communis]
20 Hb_011344_050 0.1008474504 - - PREDICTED: 21 kDa protein [Jatropha curcas]

Gene co-expression network

sample Hb_159791_010 Hb_159791_010 Hb_001141_430 Hb_001141_430 Hb_159791_010--Hb_001141_430 Hb_004757_010 Hb_004757_010 Hb_159791_010--Hb_004757_010 Hb_001343_060 Hb_001343_060 Hb_159791_010--Hb_001343_060 Hb_000959_170 Hb_000959_170 Hb_159791_010--Hb_000959_170 Hb_000816_170 Hb_000816_170 Hb_159791_010--Hb_000816_170 Hb_000087_160 Hb_000087_160 Hb_159791_010--Hb_000087_160 Hb_001141_430--Hb_001343_060 Hb_001141_430--Hb_004757_010 Hb_011344_110 Hb_011344_110 Hb_001141_430--Hb_011344_110 Hb_001141_430--Hb_000816_170 Hb_001712_010 Hb_001712_010 Hb_001141_430--Hb_001712_010 Hb_004757_010--Hb_001343_060 Hb_011344_050 Hb_011344_050 Hb_004757_010--Hb_011344_050 Hb_027411_030 Hb_027411_030 Hb_004757_010--Hb_027411_030 Hb_004757_010--Hb_001712_010 Hb_001343_060--Hb_011344_110 Hb_001269_430 Hb_001269_430 Hb_001343_060--Hb_001269_430 Hb_001343_060--Hb_000816_170 Hb_000959_170--Hb_000087_160 Hb_000959_170--Hb_004757_010 Hb_000959_170--Hb_001141_430 Hb_187906_010 Hb_187906_010 Hb_000959_170--Hb_187906_010 Hb_025557_090 Hb_025557_090 Hb_000959_170--Hb_025557_090 Hb_000358_070 Hb_000358_070 Hb_000816_170--Hb_000358_070 Hb_000012_340 Hb_000012_340 Hb_000816_170--Hb_000012_340 Hb_001232_170 Hb_001232_170 Hb_000816_170--Hb_001232_170 Hb_000243_240 Hb_000243_240 Hb_000816_170--Hb_000243_240 Hb_000201_060 Hb_000201_060 Hb_000816_170--Hb_000201_060 Hb_011930_090 Hb_011930_090 Hb_000087_160--Hb_011930_090 Hb_000087_160--Hb_187906_010 Hb_019299_010 Hb_019299_010 Hb_000087_160--Hb_019299_010 Hb_000230_220 Hb_000230_220 Hb_000087_160--Hb_000230_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.333291 33.2102 16.0924 430.538 1.07153 0.145232
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.156836 0 0 6.20673 28.151

CAGE analysis