Hb_001013_070

Information

Type -
Description -
Location Contig1013: 77868-78131
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001013_070 0.0 - - -
2 Hb_005373_030 0.0780930797 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003582_010 0.1117906534 - - hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
4 Hb_003212_030 0.1142178828 - - multidrug resistance pump, putative [Ricinus communis]
5 Hb_033153_030 0.1165376633 - - PREDICTED: uncharacterized protein LOC105650145 [Jatropha curcas]
6 Hb_050229_030 0.118576519 - - unnamed protein product [Coffea canephora]
7 Hb_000445_480 0.11928104 - - cytochrome P450, putative [Ricinus communis]
8 Hb_002999_010 0.1211723729 - - PREDICTED: extracellular ribonuclease LE-like [Vitis vinifera]
9 Hb_002511_050 0.1227357829 - - ATP binding protein, putative [Ricinus communis]
10 Hb_008385_010 0.1232357792 - - sulfate transporter, putative [Ricinus communis]
11 Hb_177587_010 0.1233393744 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
12 Hb_000334_040 0.1261748396 - - hypothetical protein POPTR_0001s41860g [Populus trichocarpa]
13 Hb_001529_010 0.1284030048 - - -
14 Hb_002837_150 0.1334353814 - - hypothetical protein EUGRSUZ_L00324 [Eucalyptus grandis]
15 Hb_001269_440 0.1340729378 - - hypothetical protein JCGZ_04288 [Jatropha curcas]
16 Hb_000086_160 0.1357861877 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 21/22 [Jatropha curcas]
17 Hb_001255_030 0.1408913927 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
18 Hb_103632_010 0.1423194674 - - triacylglycerol lipase, putative [Ricinus communis]
19 Hb_004757_040 0.143352579 - - -
20 Hb_002874_100 0.1434018674 - - cytochrome P450, putative [Ricinus communis]

Gene co-expression network

sample Hb_001013_070 Hb_001013_070 Hb_005373_030 Hb_005373_030 Hb_001013_070--Hb_005373_030 Hb_003582_010 Hb_003582_010 Hb_001013_070--Hb_003582_010 Hb_003212_030 Hb_003212_030 Hb_001013_070--Hb_003212_030 Hb_033153_030 Hb_033153_030 Hb_001013_070--Hb_033153_030 Hb_050229_030 Hb_050229_030 Hb_001013_070--Hb_050229_030 Hb_000445_480 Hb_000445_480 Hb_001013_070--Hb_000445_480 Hb_002999_010 Hb_002999_010 Hb_005373_030--Hb_002999_010 Hb_005373_030--Hb_003212_030 Hb_005373_030--Hb_033153_030 Hb_005373_030--Hb_000445_480 Hb_007477_020 Hb_007477_020 Hb_005373_030--Hb_007477_020 Hb_008385_010 Hb_008385_010 Hb_003582_010--Hb_008385_010 Hb_002511_050 Hb_002511_050 Hb_003582_010--Hb_002511_050 Hb_000705_070 Hb_000705_070 Hb_003582_010--Hb_000705_070 Hb_001322_010 Hb_001322_010 Hb_003582_010--Hb_001322_010 Hb_001013_060 Hb_001013_060 Hb_003582_010--Hb_001013_060 Hb_002837_150 Hb_002837_150 Hb_003212_030--Hb_002837_150 Hb_000086_160 Hb_000086_160 Hb_003212_030--Hb_000086_160 Hb_001269_440 Hb_001269_440 Hb_003212_030--Hb_001269_440 Hb_004617_010 Hb_004617_010 Hb_003212_030--Hb_004617_010 Hb_033153_030--Hb_000445_480 Hb_001529_010 Hb_001529_010 Hb_033153_030--Hb_001529_010 Hb_002874_100 Hb_002874_100 Hb_033153_030--Hb_002874_100 Hb_007426_100 Hb_007426_100 Hb_033153_030--Hb_007426_100 Hb_002894_020 Hb_002894_020 Hb_033153_030--Hb_002894_020 Hb_000334_040 Hb_000334_040 Hb_050229_030--Hb_000334_040 Hb_177587_010 Hb_177587_010 Hb_050229_030--Hb_177587_010 Hb_009466_040 Hb_009466_040 Hb_050229_030--Hb_009466_040 Hb_001645_100 Hb_001645_100 Hb_050229_030--Hb_001645_100 Hb_050229_030--Hb_008385_010 Hb_000445_480--Hb_002894_020 Hb_000445_480--Hb_001529_010 Hb_000445_480--Hb_002874_100 Hb_000445_480--Hb_007426_100 Hb_000363_100 Hb_000363_100 Hb_000445_480--Hb_000363_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 58.2882 6.99448 376.434 0 2.04991
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 26.0949 3.57368

CAGE analysis