Hb_007477_020

Information

Type -
Description -
Location Contig7477: 26419-28071
Sequence    

Annotation

kegg
ID rcu:RCOM_1723770
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012085185.1
description PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
swissprot
ID Q9SVU0
description Probable indole-3-pyruvate monooxygenase YUCCA8 OS=Arabidopsis thaliana GN=YUC8 PE=2 SV=1
trembl
ID A0A067K3P7
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_17597 PE=3 SV=1
Gene Ontology
ID GO:0004499
description probable indole-3-pyruvate monooxygenase yucca8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007477_020 0.0 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Jatropha curcas]
2 Hb_003058_090 0.0760513957 - - hypothetical protein POPTR_0001s28080g [Populus trichocarpa]
3 Hb_000480_050 0.09025175 - - hypothetical protein PHAVU_004G154200g [Phaseolus vulgaris]
4 Hb_033153_030 0.0962073582 - - PREDICTED: uncharacterized protein LOC105650145 [Jatropha curcas]
5 Hb_002999_010 0.1007399619 - - PREDICTED: extracellular ribonuclease LE-like [Vitis vinifera]
6 Hb_002874_100 0.1038369663 - - cytochrome P450, putative [Ricinus communis]
7 Hb_005373_030 0.1082267298 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000194_030 0.112316665 transcription factor TF Family: NAC NAC transcription factor 059 [Jatropha curcas]
9 Hb_004926_010 0.1147518232 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
10 Hb_159012_010 0.1187044681 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Jatropha curcas]
11 Hb_007426_100 0.1189450661 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000269_050 0.1199861216 - - PREDICTED: beta-glucosidase 12-like [Gossypium raimondii]
13 Hb_000237_010 0.1241550464 transcription factor TF Family: SRS conserved hypothetical protein [Ricinus communis]
14 Hb_001104_290 0.1242411873 transcription factor TF Family: ERF Dehydration-responsive element-binding protein 1B, putative [Theobroma cacao]
15 Hb_000363_100 0.1249491136 - - -
16 Hb_000445_480 0.1260559804 - - cytochrome P450, putative [Ricinus communis]
17 Hb_001529_010 0.1275138323 - - -
18 Hb_002853_010 0.1324759467 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004031_060 0.1325317666 - - hypothetical protein B456_007G3219002, partial [Gossypium raimondii]
20 Hb_106677_010 0.1351807078 - - 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007477_020 Hb_007477_020 Hb_003058_090 Hb_003058_090 Hb_007477_020--Hb_003058_090 Hb_000480_050 Hb_000480_050 Hb_007477_020--Hb_000480_050 Hb_033153_030 Hb_033153_030 Hb_007477_020--Hb_033153_030 Hb_002999_010 Hb_002999_010 Hb_007477_020--Hb_002999_010 Hb_002874_100 Hb_002874_100 Hb_007477_020--Hb_002874_100 Hb_005373_030 Hb_005373_030 Hb_007477_020--Hb_005373_030 Hb_000269_050 Hb_000269_050 Hb_003058_090--Hb_000269_050 Hb_003058_090--Hb_002874_100 Hb_007426_100 Hb_007426_100 Hb_003058_090--Hb_007426_100 Hb_000296_030 Hb_000296_030 Hb_003058_090--Hb_000296_030 Hb_001104_290 Hb_001104_290 Hb_003058_090--Hb_001104_290 Hb_004926_010 Hb_004926_010 Hb_000480_050--Hb_004926_010 Hb_159012_010 Hb_159012_010 Hb_000480_050--Hb_159012_010 Hb_000480_050--Hb_002999_010 Hb_000194_030 Hb_000194_030 Hb_000480_050--Hb_000194_030 Hb_004031_060 Hb_004031_060 Hb_000480_050--Hb_004031_060 Hb_000445_480 Hb_000445_480 Hb_033153_030--Hb_000445_480 Hb_001529_010 Hb_001529_010 Hb_033153_030--Hb_001529_010 Hb_033153_030--Hb_002874_100 Hb_033153_030--Hb_007426_100 Hb_002894_020 Hb_002894_020 Hb_033153_030--Hb_002894_020 Hb_033153_030--Hb_005373_030 Hb_002999_010--Hb_005373_030 Hb_016120_030 Hb_016120_030 Hb_002999_010--Hb_016120_030 Hb_002999_010--Hb_004926_010 Hb_002999_010--Hb_004031_060 Hb_002874_100--Hb_007426_100 Hb_000363_100 Hb_000363_100 Hb_002874_100--Hb_000363_100 Hb_002874_100--Hb_001104_290 Hb_002874_100--Hb_000445_480 Hb_003252_030 Hb_003252_030 Hb_002874_100--Hb_003252_030 Hb_001013_070 Hb_001013_070 Hb_005373_030--Hb_001013_070 Hb_003212_030 Hb_003212_030 Hb_005373_030--Hb_003212_030 Hb_005373_030--Hb_000445_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0496571 0.0123695 1.02865 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0714955 0

CAGE analysis