Hb_008385_010

Information

Type -
Description -
Location Contig8385: 7509-11658
Sequence    

Annotation

kegg
ID rcu:RCOM_0443450
description sulfate transporter, putative
nr
ID XP_002534156.1
description sulfate transporter, putative [Ricinus communis]
swissprot
ID P53392
description High affinity sulfate transporter 2 OS=Stylosanthes hamata GN=ST2 PE=2 SV=1
trembl
ID B9T7D7
description Sulfate transporter, putative OS=Ricinus communis GN=RCOM_0443450 PE=4 SV=1
Gene Ontology
ID GO:0005886
description sulfate transporter -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008385_010 0.0 - - sulfate transporter, putative [Ricinus communis]
2 Hb_002511_050 0.0546555124 - - ATP binding protein, putative [Ricinus communis]
3 Hb_003582_010 0.109707915 - - hypothetical protein EUGRSUZ_B026451, partial [Eucalyptus grandis]
4 Hb_001645_100 0.1226452623 - - -
5 Hb_001013_070 0.1232357792 - - -
6 Hb_005900_020 0.1354418747 - - -
7 Hb_050229_030 0.1367331131 - - unnamed protein product [Coffea canephora]
8 Hb_000840_220 0.1368814627 - - PREDICTED: RING-H2 finger protein ATL78-like [Jatropha curcas]
9 Hb_010926_020 0.138794485 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Camelina sativa]
10 Hb_000501_090 0.1391776212 - - -
11 Hb_000334_040 0.1396507012 - - hypothetical protein POPTR_0001s41860g [Populus trichocarpa]
12 Hb_001529_010 0.141752197 - - -
13 Hb_001255_030 0.1425664174 - - PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840, partial [Sesamum indicum]
14 Hb_009466_040 0.1428462724 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
15 Hb_005736_010 0.1483571656 - - PREDICTED: bidirectional sugar transporter SWEET1 isoform X2 [Jatropha curcas]
16 Hb_000445_480 0.1491975485 - - cytochrome P450, putative [Ricinus communis]
17 Hb_004757_040 0.1547835965 - - -
18 Hb_066350_010 0.1552855481 - - somatic embryogenesis receptor-like kinase 4, partial [Rosa hybrid cultivar]
19 Hb_177587_010 0.1557241866 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
20 Hb_000174_020 0.1573213058 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]

Gene co-expression network

sample Hb_008385_010 Hb_008385_010 Hb_002511_050 Hb_002511_050 Hb_008385_010--Hb_002511_050 Hb_003582_010 Hb_003582_010 Hb_008385_010--Hb_003582_010 Hb_001645_100 Hb_001645_100 Hb_008385_010--Hb_001645_100 Hb_001013_070 Hb_001013_070 Hb_008385_010--Hb_001013_070 Hb_005900_020 Hb_005900_020 Hb_008385_010--Hb_005900_020 Hb_050229_030 Hb_050229_030 Hb_008385_010--Hb_050229_030 Hb_010926_020 Hb_010926_020 Hb_002511_050--Hb_010926_020 Hb_001529_010 Hb_001529_010 Hb_002511_050--Hb_001529_010 Hb_002511_050--Hb_003582_010 Hb_000445_480 Hb_000445_480 Hb_002511_050--Hb_000445_480 Hb_005736_010 Hb_005736_010 Hb_002511_050--Hb_005736_010 Hb_003582_010--Hb_001013_070 Hb_000705_070 Hb_000705_070 Hb_003582_010--Hb_000705_070 Hb_001322_010 Hb_001322_010 Hb_003582_010--Hb_001322_010 Hb_001013_060 Hb_001013_060 Hb_003582_010--Hb_001013_060 Hb_000501_090 Hb_000501_090 Hb_001645_100--Hb_000501_090 Hb_015026_010 Hb_015026_010 Hb_001645_100--Hb_015026_010 Hb_000146_100 Hb_000146_100 Hb_001645_100--Hb_000146_100 Hb_001645_100--Hb_050229_030 Hb_000334_040 Hb_000334_040 Hb_001645_100--Hb_000334_040 Hb_009466_040 Hb_009466_040 Hb_001645_100--Hb_009466_040 Hb_005373_030 Hb_005373_030 Hb_001013_070--Hb_005373_030 Hb_003212_030 Hb_003212_030 Hb_001013_070--Hb_003212_030 Hb_033153_030 Hb_033153_030 Hb_001013_070--Hb_033153_030 Hb_001013_070--Hb_050229_030 Hb_001013_070--Hb_000445_480 Hb_066350_010 Hb_066350_010 Hb_005900_020--Hb_066350_010 Hb_148914_020 Hb_148914_020 Hb_005900_020--Hb_148914_020 Hb_179118_010 Hb_179118_010 Hb_005900_020--Hb_179118_010 Hb_004590_010 Hb_004590_010 Hb_005900_020--Hb_004590_010 Hb_021443_020 Hb_021443_020 Hb_005900_020--Hb_021443_020 Hb_035006_010 Hb_035006_010 Hb_005900_020--Hb_035006_010 Hb_050229_030--Hb_000334_040 Hb_177587_010 Hb_177587_010 Hb_050229_030--Hb_177587_010 Hb_050229_030--Hb_009466_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0573886 0.00798866 0.212841 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0218037 0

CAGE analysis